Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M04
(927 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 71 6e-12
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 71 6e-12
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 71 6e-12
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 71 6e-12
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 71 6e-12
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 71 6e-12
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 71 6e-12
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 71 6e-12
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
LA LGG P+A D++ L SVGIEAD ++L KVI+ELNGK +E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 281 G 283
G
Sbjct: 69 G 69
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
LA LGG P+A D++ L SVGIEAD ++L KVI+ELNGK +E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 281 G 283
G
Sbjct: 69 G 69
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
LA LGG P+A D++ L SVGIEAD ++L KVI+ELNGK +E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 281 G 283
G
Sbjct: 69 G 69
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
LA LGG P+A D++ L SVGIEAD ++L KVI+ELNGK +E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 281 G 283
G
Sbjct: 69 G 69
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
LA LGG P+A D++ L SVGIEAD ++L KVI+ELNGK +E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 281 G 283
G
Sbjct: 69 G 69
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
LA LGG P+A D++ L SVGIEAD ++L KVI+ELNGK +E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 281 G 283
G
Sbjct: 69 G 69
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
LA LGG P+A D++ L SVGIEAD ++L KVI+ELNGK +E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 281 G 283
G
Sbjct: 69 G 69
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 101 LAVLGGXXXPAAADVEXXLSSVGIEADAEKLKKVITELNGKXVEXLIAAGREXLSSMPVG 280
LA LGG P+A D++ L SVGIEAD ++L KVI+ELNGK +E +IA G L+S+P G
Sbjct: 9 LAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAG 68
Query: 281 G 283
G
Sbjct: 69 G 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,128,453
Number of Sequences: 237096
Number of extensions: 735795
Number of successful extensions: 1942
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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