Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M02
(899 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 112 1e-23
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 89 1e-16
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 87 8e-16
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 85 2e-15
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 72 2e-11
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 1e-10
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 67 5e-10
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 66 9e-10
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 66 1e-09
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 62 1e-08
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 61 3e-08
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 57 5e-07
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 54 4e-06
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 54 4e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 9e-06
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 52 3e-05
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 52 3e-05
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 49 2e-04
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 49 2e-04
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 48 3e-04
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 47 6e-04
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 47 8e-04
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 46 0.002
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 46 0.002
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 44 0.005
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 43 0.009
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 42 0.016
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 42 0.021
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 40 0.065
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 40 0.11
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 39 0.20
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 39 0.20
UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=... 33 9.9
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 112 bits (269), Expect = 1e-23
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRF 321
LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGEKG++I+ELTSVVQKRF
Sbjct: 21 LNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGKKIKELTSVVQKRF 77
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 86.6 bits (205), Expect = 8e-16
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFN 324
L EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGRRIRELT+ +Q+RFN
Sbjct: 72 LFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFN 129
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 85.4 bits (202), Expect = 2e-15
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
LNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GRRI ELTS++ KRF +
Sbjct: 22 LNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRRIHELTSLIVKRFKL 80
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 72.1 bits (169), Expect = 2e-11
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 276
G R LNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK
Sbjct: 15 GIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +1
Query: 172 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 306
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK RRIREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 67.3 bits (157), Expect = 5e-10
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
LNE LTREL ++GY G EVR TP R+EIII A T+ + GRR++E+ ++QKR+ +
Sbjct: 22 LNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDNHGRRLQEVRMMIQKRWRL 80
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 66.5 bits (155), Expect = 9e-10
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +1
Query: 172 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 309
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +1
Query: 172 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 306
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGRRIRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.012
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 172 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 267
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G L+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G++ +ELT +Q
Sbjct: 28 GVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGKKHKELTQFLQ 87
Query: 313 KRF 321
KRF
Sbjct: 88 KRF 90
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/59 (42%), Positives = 42/59 (71%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
++EFL +EL GY G++++ TP+ +++II A V+G GRRIRELT +++K+F +
Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILEKQFGL 75
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 57.2 bits (132), Expect = 5e-07
Identities = 23/65 (35%), Positives = 42/65 (64%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G R ++EF EL GY G++V TP+ ++I++ A + V+G+ G+ IR++T+ ++
Sbjct: 11 GLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTELE 70
Query: 313 KRFNI 327
RFN+
Sbjct: 71 DRFNL 75
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +1
Query: 229 EIIIMATRTQSVLGEKGRRIRELTSVVQKRF 321
EIII AT+TQ+VLG+KGR+IRELTSVVQKRF
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRF 131
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 54.4 bits (125), Expect = 4e-06
Identities = 21/65 (32%), Positives = 42/65 (64%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G R ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R +T ++
Sbjct: 10 GLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVRAITQKLK 69
Query: 313 KRFNI 327
+F++
Sbjct: 70 NKFDL 74
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 53.2 bits (122), Expect = 9e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +1
Query: 172 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 51.6 bits (118), Expect = 3e-05
Identities = 21/60 (35%), Positives = 42/60 (70%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIP 330
++E+L + GYS VE++ TP+ + +II A R+ +++G +G+ I+++T V+++ F IP
Sbjct: 22 VDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIKQITKVLEEWFGIP 81
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 51.6 bits (118), Expect = 3e-05
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +1
Query: 136 FSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQK 315
++ L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K
Sbjct: 12 YNMMKLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEK 71
Query: 316 RFNI 327
F++
Sbjct: 72 DFDL 75
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
++E+L ++ Y+GVEV TPI + +II A R ++G GR I++L + +K F +
Sbjct: 18 IDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFGL 76
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 48.8 bits (111), Expect = 2e-04
Identities = 19/65 (29%), Positives = 42/65 (64%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G+ + ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR+LT V
Sbjct: 11 GYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIRKLTRDVA 70
Query: 313 KRFNI 327
++++
Sbjct: 71 NKYSL 75
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/65 (30%), Positives = 40/65 (61%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+++R+LT +
Sbjct: 11 GVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVRQLTQDLA 70
Query: 313 KRFNI 327
++I
Sbjct: 71 TDYDI 75
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 47.2 bits (107), Expect = 6e-04
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I++L V++K F +
Sbjct: 18 VDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIKQLAQVLEKFFGL 76
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 46.8 bits (106), Expect = 8e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + L+E+L EL GY G+ ++ P ++II R +G +GR IR + VQ
Sbjct: 18 GMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRRVEEEVQ 77
Query: 313 KRF 321
+RF
Sbjct: 78 ERF 80
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEII 237
LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 101 LNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 45.6 bits (103), Expect = 0.002
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 139 SRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKR 318
S ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++ELT +
Sbjct: 12 SETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATE 71
Query: 319 FNI 327
+++
Sbjct: 72 YSV 74
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G LNE+L R+L Y + TPI +++I+ A V+G KG I+ + V++
Sbjct: 12 GLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLE 71
Query: 313 KRFNI 327
+ F I
Sbjct: 72 REFGI 76
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 43.2 bits (97), Expect = 0.009
Identities = 17/59 (28%), Positives = 35/59 (59%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
+ EFL L++ GY E+ TP+ + I+I A R ++G KG ++E+++++ + +
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGV 82
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G L EF + L +G+S +E+R+ +II+ + +GEK R+R+ +
Sbjct: 26 GLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQHLAA 85
Query: 313 KRFNIPXXICXIV 351
+R +P IV
Sbjct: 86 QRLEVPDESVEIV 98
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 41.9 bits (94), Expect = 0.021
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
L+EFL + GY+G+E+ TP ++I A ++G G IR+L +++Q F +
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIRKLMTIMQTHFGL 78
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 40.3 bits (90), Expect = 0.065
Identities = 14/67 (20%), Positives = 38/67 (56%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIP 330
+ E+L L + Y ++ T + + I+I+A + ++G KG++++ L +++ +FN+
Sbjct: 15 IKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKALADILKSKFNLD 74
Query: 331 XXICXIV 351
+ ++
Sbjct: 75 NVVIDVI 81
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/59 (32%), Positives = 35/59 (59%)
Frame = +1
Query: 151 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
+ E++ E+ G+ GV++ TP+ +++ + R V+G+ GRRI+ LT + K F I
Sbjct: 17 VKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIKALTEKL-KDFGI 74
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 142 RQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRF 321
R + E+L RE G+ G+E TP +++ + A + V+G +G+ I EL ++ F
Sbjct: 18 RHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQYRLKSDF 77
Query: 322 NI 327
+
Sbjct: 78 KL 79
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 38.7 bits (86), Expect = 0.20
Identities = 13/57 (22%), Positives = 33/57 (57%)
Frame = +1
Query: 157 EFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 327
E++ +E G+ + ++ TP + I + R V+G +G +++++T ++K++ I
Sbjct: 18 EYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKVQQMTDTLEKKYGI 74
>UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g06190.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 295
Score = 33.1 bits (72), Expect = 9.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 300 SELTDSASFLSEHTLCPGGHNNDLRADGSD 211
SEL + + LSEH+L GH +L ADG D
Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,046,619
Number of Sequences: 1657284
Number of extensions: 5273656
Number of successful extensions: 13634
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 13425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13633
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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