Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_M02
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 112 2e-24
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 112 2e-24
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 112 2e-24
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 112 2e-24
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 112 2e-24
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 112 2e-24
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 112 2e-24
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 112 2e-24
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 112 2e-24
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 112 2e-24
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 112 2e-24
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 112 2e-24
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 112 2e-24
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 112 2e-24
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 112 2e-24
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 112 2e-24
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 35 0.35
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAECLRYKL 109
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 14 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 73
Query: 313 KRFNIP 330
KRF P
Sbjct: 74 KRFGFP 79
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 78 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 108
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 14 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 73
Query: 313 KRFNIP 330
KRF P
Sbjct: 74 KRFGFP 79
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 78 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 108
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEEVATRGLCAIAQAESLRYKL 109
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 112 bits (269), Expect = 2e-24
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +1
Query: 133 GFSRQXLNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 312
G + LNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQ
Sbjct: 15 GIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQ 74
Query: 313 KRFNIP 330
KRF P
Sbjct: 75 KRFGFP 80
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 109
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 35.1 bits (77), Expect = 0.35
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 274 KGRRIRELTSVVQKRFNIP 330
+GRRIRELT+VVQKRF P
Sbjct: 6 QGRRIRELTAVVQKRFGFP 24
Score = 30.3 bits (65), Expect = 10.0
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2
Query: 326 FQXXSVXLYAEXVATRXXWAIXXAEXLKXXL 418
F SV LYAE VATR AI AE L+ L
Sbjct: 23 FPEGSVELYAEKVATRGLCAIAQAESLRYKL 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,740,215
Number of Sequences: 237096
Number of extensions: 865291
Number of successful extensions: 1744
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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