Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_L24
(920 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 39 0.006
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.16
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.16
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.16
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.50
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.2
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 8.2
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 745 PPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPXXXPXPXXPXP 909
PP P P P P P P PP P P P P P P P P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 724 PPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPXXXP 888
PP PP P P PP P P P PP P P P P P
Sbjct: 34 PPPMCAPPPLP-CPPPPICP-PQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPX 879
P G PP PP P PP P P P PP P P P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
Query: 880 XXPXPXXPXP 909
P P
Sbjct: 797 APVIPDYLPP 806
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Frame = +1
Query: 715 SSXPPXXXXXPPXPXLP----XPPXXPXXXXXXP---XPXXPPXXXXXXP-XXXPXXXPX 870
S+ PP PP P LP PP P P P PP P P P
Sbjct: 704 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 871 XPXXXPXPXXPXP 909
P P P P P
Sbjct: 764 PPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPX 879
P G PP P P PP P P PP P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 880 XXPXPXXPXP 909
P P P P
Sbjct: 768 CPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXP-XPXXPPXXXXXXPXXXPXXXPXXP 876
P G PP PP P PP P P PP P P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 877 XXXPXPXXP 903
P P P
Sbjct: 781 KGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPX 879
P G PP PP P PP P P P PP P P P
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
Query: 880 XXPXPXXPXP 909
P P
Sbjct: 797 APVIPDYLPP 806
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Frame = +1
Query: 715 SSXPPXXXXXPPXPXLP----XPPXXPXXXXXXP---XPXXPPXXXXXXP-XXXPXXXPX 870
S+ PP PP P LP PP P P P PP P P P
Sbjct: 704 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Query: 871 XPXXXPXPXXPXP 909
P P P P P
Sbjct: 764 PPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPX 879
P G PP P P PP P P PP P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 880 XXPXPXXPXP 909
P P P P
Sbjct: 768 CPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXP-XPXXPPXXXXXXPXXXPXXXPXXP 876
P G PP PP P PP P P PP P P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 877 XXXPXPXXP 903
P P P
Sbjct: 781 KGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPX 879
P G PP PP P PP P P P PP P P P
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 379
Query: 880 XXPXPXXPXP 909
P P
Sbjct: 380 APVIPDYLPP 389
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Frame = +1
Query: 715 SSXPPXXXXXPPXPXLP----XPPXXPXXXXXXP---XPXXPPXXXXXXP-XXXPXXXPX 870
S+ PP PP P LP PP P P P PP P P P
Sbjct: 287 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Query: 871 XPXXXPXPXXPXP 909
P P P P P
Sbjct: 347 PPGGCPPPPPPPP 359
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPX 879
P G PP P P PP P P PP P P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 880 XXPXPXXPXP 909
P P P P
Sbjct: 351 CPPPPPPPPP 360
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXP-XPXXPPXXXXXXPXXXPXXXPXXP 876
P G PP PP P PP P P PP P P P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 877 XXXPXPXXP 903
P P P
Sbjct: 364 KGGPPPPPP 372
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +1
Query: 712 GSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPXXXPX 891
GSS PP PP P +P P P P PP P P P P P
Sbjct: 135 GSSPPP-----PPPPRVPRTPPPRSPPPRRP-PMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
Query: 892 PXXPXP 909
P P
Sbjct: 189 SPIPPP 194
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXP 876
P GS PP PP P PP P P PP P P P
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXP 876
P GS PP PP P PP P P PP P P P
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 700 PXXXGSSXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXP 876
P GS PP PP P PP P P PP P P P
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 2/57 (3%)
Frame = +1
Query: 745 PPXPXLPXPPXXPXXXXXXPXPXXPP--XXXXXXPXXXPXXXPXXPXXXPXPXXPXP 909
PP P PP P P P PP P P P P P P P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 718 SXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXP 876
S P PP P + P P P P PP P P P P
Sbjct: 269 SVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 2/57 (3%)
Frame = +1
Query: 745 PPXPXLPXPPXXPXXXXXXPXPXXPP--XXXXXXPXXXPXXXPXXPXXXPXPXXPXP 909
PP P PP P P P PP P P P P P P P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 718 SXPPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXP 876
S P PP P + P P P P PP P P P P
Sbjct: 279 SVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Frame = +1
Query: 748 PXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXP-XXXPXXPXXXPXPXXPXP 909
P P P PP P P PP P P P P P P P
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPP 1392
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +1
Query: 724 PPXXXXXPPXPXLPXPPXXPXXXXXXPXPXXPPXXXXXXPXXXPXXXPXXPXXXPXP 894
PP PP P PP P P P P P P P P
Sbjct: 42 PPCFDCPPPAPIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPPCFGPACPPP 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,193,798
Number of Sequences: 27780
Number of extensions: 201475
Number of successful extensions: 825
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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