Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L21
         (1351 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   0.74 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.8 bits (54), Expect = 0.74
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 938 NXPPPPPPP 964
           N PPPPPPP
Sbjct: 729 NAPPPPPPP 737



 Score = 23.0 bits (47), Expect = 5.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 935 KNXPPPPPPP 964
           +N  PPPPPP
Sbjct: 727 ENNAPPPPPP 736


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 319 KXGGGXXGXGXXXPPG 272
           K GGG  G G   PPG
Sbjct: 523 KGGGGGSGSGNNQPPG 538


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.156    0.567 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,267
Number of Sequences: 336
Number of extensions: 3288
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 40076790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)