Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L19
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ...    29   5.8  
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ...    29   5.8  

>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
           protein Y38E10A.6b protein.
          Length = 1345

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/67 (22%), Positives = 33/67 (49%)
 Frame = +3

Query: 120 NXFCTYFELRLRVGAGSRRGQRCSRAQVEALQEN*ESGTQRSRWINQSGSSYSRHRASKI 299
           N    YF +R R+  G++RG+R S +  +   E  + G +++   N+  +  +  +A K 
Sbjct: 637 NFVSNYFTIRKRMSKGAKRGERLSDSDDDD-DEPEDDGEEKNEEKNEEEARKAAEKAEKA 695

Query: 300 IRKVDFI 320
            +  + +
Sbjct: 696 QKMTEML 702


>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
           protein Y38E10A.6a protein.
          Length = 1343

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/67 (22%), Positives = 33/67 (49%)
 Frame = +3

Query: 120 NXFCTYFELRLRVGAGSRRGQRCSRAQVEALQEN*ESGTQRSRWINQSGSSYSRHRASKI 299
           N    YF +R R+  G++RG+R S +  +   E  + G +++   N+  +  +  +A K 
Sbjct: 635 NFVSNYFTIRKRMSKGAKRGERLSDSDDDD-DEPEDDGEEKNEEKNEEEARKAAEKAEKA 693

Query: 300 IRKVDFI 320
            +  + +
Sbjct: 694 QKMTEML 700


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,215,352
Number of Sequences: 27780
Number of extensions: 166062
Number of successful extensions: 294
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)