Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_L18
(864 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four ... 37 0.082
BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like pro... 32 3.1
AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein. 32 3.1
X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 prot... 31 7.2
AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 7.2
AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 7.2
AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 7.2
AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 7.2
AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 7.2
AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 7.2
AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2 (c... 31 7.2
AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2 pr... 31 7.2
>AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four and
a half LIM domain protein 2 protein.
Length = 151
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 467 AG*EKGSTEACSSTLLLPRASTXPTARVSTCPLLTRSIPTSSLTAMS 607
AG S+ +S+ L PR S+ T R+S CP + ++P S+ +A S
Sbjct: 63 AGMRPASSATAASSQLEPRVSSPKTIRISVCPAMRNNMPCSAFSAKS 109
>BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like
protein rA9 protein.
Length = 1649
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -1
Query: 564 SGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLEL 385
+G E +VGS G S EH S E++E S EDSED DG LE+
Sbjct: 28 AGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEV 86
Query: 384 VG 379
G
Sbjct: 87 AG 88
>AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.
Length = 1654
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -1
Query: 564 SGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLEL 385
+G E +VGS G S EH S E++E S EDSED DG LE+
Sbjct: 33 AGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEV 91
Query: 384 VG 379
G
Sbjct: 92 AG 93
>X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2
protein.
Length = 4967
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 383 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 435
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 436 LSKKAKASTVDLPIESVSLSLQDLIGYFH 464
>AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2
protein.
Length = 4967
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = -1
Query: 660 RTGSLAALVIFHHKGFTDDMAVNEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHASVDP 481
R GS+ I HH+G DD GI L RS E+ + + +D
Sbjct: 383 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 435
Query: 480 FSHPARSPHENIEVLSVVEDSEDFDGFFH 394
S A++ ++ + SV +D G+FH
Sbjct: 436 LSKKAKASTVDLPIESVSLSLQDLIGYFH 464
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,761,897
Number of Sequences: 237096
Number of extensions: 1496225
Number of successful extensions: 2859
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2859
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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