Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L18
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-29|CAB61107.1|  209|Caenorhabditis elegans Hypothetical...    31   1.4  
Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   2.4  
AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical...    30   2.4  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical pr...    29   5.7  

>AL132949-29|CAB61107.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.33 protein.
          Length = 209

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
 Frame = -1

Query: 669 YFQRTG-SLAALVIFHHKG--FTDDMAVNEEVGIDLVRS----GQVETLAVGSVEARGSK 511
           YF   G +  A ++FH  G  F D+   + +   + ++     GQV  L+V   +   S 
Sbjct: 8   YFDARGYAEPARILFHLAGVPFEDNRLTHGDGSWEKIKDKTPFGQVPVLSVDGFDIPQSA 67

Query: 510 SVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELVGVDEGLSTREXA 346
           ++  + + + F +  ++P E     ++V+  +DF G F   ++    G    E A
Sbjct: 68  AIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGAFRQLIMAQRSGKPAEEIA 121


>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +2

Query: 485 STEACSSTLLLPRASTXPTARVSTCPLLTRSIPTSSLTAMSSVKPL 622
           + EA SST LL  +ST   +  ST   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLLSTSSTAEIS--STTRTVSRSIKPETSTASTTIRPL 134


>AL132949-27|CAB61105.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.31 protein.
          Length = 209

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = -1

Query: 561 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 382
           GQV  L V   +   S ++  + + + F +  ++P E +   ++V+  +DF G F   ++
Sbjct: 51  GQVPYLTVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQVWADAIVDQFKDFMGSFRERIM 109

Query: 381 GVDEGLSTREXA 346
               G S  E A
Sbjct: 110 AHFAGKSQEEIA 121


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 465 RSPHENIEVLSVVEDSEDFD 406
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>Z80217-2|CAB02288.1|  209|Caenorhabditis elegans Hypothetical
           protein F37B1.2 protein.
          Length = 209

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = -1

Query: 576 DLVRSGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 397
           D    GQ+  L V   E   S ++  + +   F    ++P E   V +VV+  +DF G F
Sbjct: 46  DKTPMGQMPVLNVDGFEIPQSAAITRYLA-RKFGFAGKTPEEEAWVDAVVDQFKDFFGEF 104

Query: 396 HLELVGVDEGLSTRE 352
              ++    G S  E
Sbjct: 105 RKLIIAQRAGKSVEE 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,317,178
Number of Sequences: 27780
Number of extensions: 223360
Number of successful extensions: 455
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)