Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L17
         (1032 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    26   0.41 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   3.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   5.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   5.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   6.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   8.8  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 699 PPPSXPPXTXPPXXPPTXXPP 761
           P P  PP   PP  PPT   P
Sbjct: 176 PLPQVPPLPLPPIFPPTMINP 196



 Score = 25.0 bits (52), Expect = 0.95
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = +3

Query: 714 PPXTXPPXXPPTXXPPPXXXSXPXPSXTXPPPXPFPXPLXPXPPXPPPPXXPPPPPXXXX 893
           PP        P   P P   S   P    PP         P P  PP P  P  PP    
Sbjct: 139 PPGNVLNLTMPKYEPNP---SIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMIN 195

Query: 894 P 896
           P
Sbjct: 196 P 196



 Score = 25.0 bits (52), Expect = 0.95
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
 Frame = +3

Query: 795 TXPPPXPFPXPLXPXPPXPPP----PXXPPPPPXXXXPXPPPXXP 917
           T P   P P  + P P  PP        PP P     P PP   P
Sbjct: 147 TMPKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = +2

Query: 488 PPPPXXXPXPPLPXXPXXSPPXXAAPTXPPXPXXPHPXPPPXXXP 622
           P P    P P LP            P  PP P  P   PP    P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPP-IFPPTMINP 196


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 7/53 (13%)
 Frame = +3

Query: 759 PPXXXSXPXPSXTXPPPXPFPXPLXPX-------PPXPPPPXXPPPPPXXXXP 896
           P    S   PS +   P     PL P        PP P P   PP  P    P
Sbjct: 702 PSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNPVGTNP 754



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 795 TXPPPXPFPXPLXPXPPXPP 854
           T PP  PFP    P P   P
Sbjct: 160 TRPPMYPFPAGQYPYPILSP 179


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 7/53 (13%)
 Frame = +3

Query: 759 PPXXXSXPXPSXTXPPPXPFPXPLXPX-------PPXPPPPXXPPPPPXXXXP 896
           P    S   PS +   P     PL P        PP P P   PP  P    P
Sbjct: 594 PSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRNPVGTNP 646



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 795 TXPPPXPFPXPLXPXPPXPP 854
           T PP  PFP    P P   P
Sbjct: 52  TRPPMYPFPAGQYPYPILSP 71


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/39 (28%), Positives = 12/39 (30%)
 Frame = +3

Query: 756 PPPXXXSXPXPSXTXPPPXPFPXPLXPXPPXPPPPXXPP 872
           P P   + P P    PP  P      P    P P    P
Sbjct: 400 PEPTISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVP 438


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 342 LQIFIXXVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTL 217
           L IF   +E V      FL ++ GQG FN      N  L T+
Sbjct: 247 LVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLLTV 288


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +3

Query: 699 PPPSXPPXTXPPXXPPTXXPP 761
           P P  PP   PP   PT   P
Sbjct: 176 PLPQVPPLPLPPIFAPTMINP 196



 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/35 (31%), Positives = 11/35 (31%)
 Frame = +2

Query: 488 PPPPXXXPXPPLPXXPXXSPPXXAAPTXPPXPXXP 592
           P P    P P LP            P  PP P  P
Sbjct: 153 PNPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLPP 187



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 17/61 (27%), Positives = 17/61 (27%)
 Frame = +3

Query: 714 PPXTXPPXXPPTXXPPPXXXSXPXPSXTXPPPXPFPXPLXPXPPXPPPPXXPPPPPXXXX 893
           PP        P   P P   S   P    PP         P P  PP P  P   P    
Sbjct: 139 PPGNVLNLTMPKYEPNP---SIIDPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAPTMIN 195

Query: 894 P 896
           P
Sbjct: 196 P 196


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +2

Query: 494 PPXXXPXPPLPXXPXXSPPXXAAPTXPPXPXXP 592
           PP      P    P  +     +PT PP P  P
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPP 104



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 732 PXXPPTXXPPPXXXSXP 782
           P  PPT  PPP     P
Sbjct: 95  PTTPPTPSPPPEERLTP 111


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 261 FNFFPQFLNCFLRTLSQRIYAIVFFRSIS 175
           F   P+ +    +T  Q+ YA+ FF ++S
Sbjct: 16  FALTPRSIKLEKQTFIQKFYAVAFFLALS 44


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 807 GGGXXGRXXGGXGXGGG 757
           GGG  G   G  G GGG
Sbjct: 92  GGGRGGGRDGDRGDGGG 108


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 892 PPAPLPPXPXPXXXRPXPPXP 954
           PP P P        +P PP P
Sbjct: 250 PPTPKPRPTKVSRRKPRPPRP 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,737
Number of Sequences: 336
Number of extensions: 6553
Number of successful extensions: 44
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29382645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)