Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L14
         (803 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    59   1e-07
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    53   1e-05
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    50   5e-05
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    42   0.014
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob...    40   0.073
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    40   0.097
UniRef50_Q9BV83 Cluster: SLC25A16 protein; n=1; Homo sapiens|Rep...    33   8.4  

>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 59.3 bits (137), Expect = 1e-07
 Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +3

Query: 294 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRRXYGYPQNQGITQ 461
           CI + A AR EAV VL ALPL RS TRC RS GCG      +  R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 52.8 bits (121), Expect = 1e-05
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = +3

Query: 318 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 416
           R   +C  G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26  RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 50.4 bits (115), Expect = 5e-05
 Identities = 22/25 (88%), Positives = 22/25 (88%)
 Frame = -1

Query: 455 YPLILWITVXPPLSELIPLAAAERP 381
           YPLILWITV PPLSEL PLAA ERP
Sbjct: 32  YPLILWITVLPPLSELTPLAAVERP 56


>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 42.3 bits (95), Expect = 0.014
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = +1

Query: 220 INKLTTTIAFILCFRFRXXVWEVFSALMNRPTRGERRFAYW 342
           +++LT      L  RF      V +ALMNRPTRGERRFAYW
Sbjct: 1   MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41


>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
           Enterobacteriaceae|Rep: Lactose operon repressor -
           Escherichia coli (strain K12)
          Length = 360

 Score = 39.9 bits (89), Expect = 0.073
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -2

Query: 364 ERGSGRAPNTQTASPRALADSLMQ 293
           +R +  APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 39.5 bits (88), Expect = 0.097
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +2

Query: 413 HSKAVXRLSTESGDNAGKXM 472
           HSKAV RLSTESGDNAGK M
Sbjct: 40  HSKAVIRLSTESGDNAGKNM 59


>UniRef50_Q9BV83 Cluster: SLC25A16 protein; n=1; Homo sapiens|Rep:
           SLC25A16 protein - Homo sapiens (Human)
          Length = 87

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 553 SSGGXAYGKRQQRGLFTXPGLWLXFCS 473
           S GG   GK    GL+  PGLWL  CS
Sbjct: 56  SGGGRTVGKWDASGLYDIPGLWLLQCS 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,660,709
Number of Sequences: 1657284
Number of extensions: 5607590
Number of successful extensions: 10986
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10983
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)