Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L13
         (934 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    27   0.16 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   7.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   7.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   7.9  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 15/50 (30%), Positives = 16/50 (32%)
 Frame = +1

Query: 769 PXXXXXSLPRPXXXPXPXXPXPPXXPXPPPXXXXXXXPPXXPPPPXPXPP 918
           P     +L  P   P P     P    PP        PP    PP P PP
Sbjct: 139 PPGNVLNLTMPKYEPNPSI-IDPGPALPPTGFLCNNYPPLPQVPPLPLPP 187


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = -3

Query: 458  GXGXPPXXXGGGPXXXGGEKKXXXGFXEXP 369
            G   PP     GP   G +     GF E P
Sbjct: 1108 GTAVPPPSGSSGPGSTGSKSPPVAGFEESP 1137


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/50 (28%), Positives = 15/50 (30%)
 Frame = +1

Query: 769 PXXXXXSLPRPXXXPXPXXPXPPXXPXPPPXXXXXXXPPXXPPPPXPXPP 918
           P     +L  P   P P     P    PP         P    PP P PP
Sbjct: 139 PPGNVLNLTMPKYEPNPSI-IDPGPALPPAGFLCNNYLPLPQVPPLPLPP 187


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 463 PPXFXXXXPXXXPPPPP 513
           PP      P   PPPPP
Sbjct: 202 PPTEDCDVPSTIPPPPP 218


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 1   TGLSXTDLTYXVGHFP 48
           TGLS T+L Y   +FP
Sbjct: 81  TGLSYTNLDYGNSNFP 96


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 1   TGLSXTDLTYXVGHFP 48
           TGLS T+L Y   +FP
Sbjct: 81  TGLSYTNLDYGNSNFP 96


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 1   TGLSXTDLTYXVGHFP 48
           TGLS T+L Y   +FP
Sbjct: 81  TGLSYTNLDYGNSNFP 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,639
Number of Sequences: 336
Number of extensions: 5802
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)