Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L12
         (1006 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             26   0.88 
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164...    26   3.8  
06_03_0082 + 16363742-16364632                                         26   7.0  
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563...    26   7.2  
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956     24   8.9  
09_06_0149 - 21222976-21223065,21223460-21224173                       24   9.2  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 25.8 bits (54), Expect(2) = 0.88
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 690 PPPPPPPXFF 719
           PPPPPPP  F
Sbjct: 114 PPPPPPPPLF 123



 Score = 24.6 bits (51), Expect(2) = 0.88
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 678 KKXXPPPPPPP 710
           ++  PPPPPPP
Sbjct: 89  RRPPPPPPPPP 99


>08_01_0207 -
           1647168-1647251,1647583-1647726,1648176-1648287,
           1648392-1648573,1648649-1648780,1648900-1649856,
           1649949-1650734
          Length = 798

 Score = 25.8 bits (54), Expect(2) = 3.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 690 PPPPPPPXF 716
           PPPPPPP F
Sbjct: 512 PPPPPPPKF 520



 Score = 22.2 bits (45), Expect(2) = 3.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 681 KXXPPPPPP 707
           K  PPPPPP
Sbjct: 510 KPPPPPPPP 518


>06_03_0082 + 16363742-16364632
          Length = 296

 Score = 25.8 bits (54), Expect(2) = 7.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 690 PPPPPPPXF 716
           PPPPPPP F
Sbjct: 169 PPPPPPPPF 177



 Score = 21.4 bits (43), Expect(2) = 7.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 678 KKXXPPPPPP 707
           ++  PPPPPP
Sbjct: 167 ERPPPPPPPP 176


>02_04_0654 -
           24755339-24755408,24755488-24755624,24756243-24756326,
           24756929-24756944,24758035-24758405
          Length = 225

 Score = 25.8 bits (54), Expect(2) = 7.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 690 PPPPPPPXF 716
           PPPPPPP F
Sbjct: 33  PPPPPPPLF 41



 Score = 21.4 bits (43), Expect(2) = 7.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 678 KKXXPPPPPP 707
           ++  PPPPPP
Sbjct: 30  QRAPPPPPPP 39


>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
          Length = 397

 Score = 23.8 bits (49), Expect(2) = 8.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 690 PPPPPPP 710
           PPPPPPP
Sbjct: 358 PPPPPPP 364



 Score = 23.0 bits (47), Expect(2) = 8.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 693 PPPPPPXFF 719
           PPPPPP  F
Sbjct: 378 PPPPPPQLF 386


>09_06_0149 - 21222976-21223065,21223460-21224173
          Length = 267

 Score = 24.2 bits (50), Expect(2) = 9.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 678 KKXXPPPPPPP 710
           ++  PPPPPPP
Sbjct: 116 ERPPPPPPPPP 126



 Score = 22.6 bits (46), Expect(2) = 9.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 690 PPPPPPPXFF 719
           PPPPPP  ++
Sbjct: 121 PPPPPPKRYY 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,065,220
Number of Sequences: 37544
Number of extensions: 227611
Number of successful extensions: 5710
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3903
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2952114480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)