Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L11
         (968 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    32   0.79 
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           31   1.0  
01_03_0005 + 11568545-11569119,11569179-11569191                       29   7.4  
01_05_0513 - 22864657-22867899                                         28   9.7  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    28   9.7  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 31.9 bits (69), Expect = 0.79
 Identities = 26/99 (26%), Positives = 27/99 (27%)
 Frame = -1

Query: 800  GGXPXPPPPXXXFXLGGGXXXXPXXXKXGXXXXXKXXXPPXXFFFXXXGXGXEXKKRRXX 621
            GG   PP P     +GG     P     G         PP  F     G           
Sbjct: 1131 GGHQAPPAPPLPEGIGG----VPPPPPVGGLGGPPAPPPPAGF----RGGTPPPNAHGGV 1182

Query: 620  GXPPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXP 504
              PPPP     G GG   P             GGP P P
Sbjct: 1183 APPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP 1221


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
 Frame = +1

Query: 481 PGXXXXGGGXGLGPPXPXXXXXX-FXXXXGXXXPPPPXXXXXGGGGXPXXLL 633
           P     G G G  PP P            G   PPPP     GGGG P   L
Sbjct: 338 PSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPAL 389



 Score = 28.7 bits (61), Expect = 7.4
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = +1

Query: 748 PPPKXXXXXGGGGXGXPPPXXXXXXXXXFXXXXXXXPPPP 867
           PPP       G G G PPP                 PPPP
Sbjct: 334 PPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPP 373



 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
 Frame = -1

Query: 620 GXPPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNP-XPPPXXXXPG 480
           G PPPP     GGGG   P             GGP    PPP    PG
Sbjct: 369 GPPPPPGAAGRGGGGPPPPAL----------PGGPRARGPPPFKKSPG 406


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 23/97 (23%), Positives = 27/97 (27%)
 Frame = +1

Query: 577 PPPPXXXXXGGGGXPXXLLFFXSXPXPXXXKKKXXGGXXXXXXXXXPXFXFXGXXXXPPP 756
           PPPP     GGGG     + + S P P        GG           +           
Sbjct: 70  PPPPSYPSGGGGGGGGGTVMYTSPPPPYS------GGGGGSSTGGGGIYYPPPTGGGGGG 123

Query: 757 KXXXXXGGGGXGXPPPXXXXXXXXXFXXXXXXXPPPP 867
                 GGGG G  P          +       PPPP
Sbjct: 124 GGGWQQGGGGGGAYPTPPPPNPFLPYFPFYYYSPPPP 160


>01_05_0513 - 22864657-22867899
          Length = 1080

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 748 PPPKXXXXXGGGGXGXPPP 804
           PPP+     GGGG   PPP
Sbjct: 165 PPPEDRPPEGGGGDNAPPP 183


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -2

Query: 433 PPPLFWGGG--AXPPFXXXXPPXXXXGGGXP 347
           PPP  +GGG  + PP     PP     GG P
Sbjct: 338 PPPSSYGGGPGSYPPSYGAPPPNPPYSGGAP 368


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,765,451
Number of Sequences: 37544
Number of extensions: 619845
Number of successful extensions: 2663
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2508
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)