Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_L11
(968 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 0.14
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 0.14
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 0.14
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.40
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.40
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 2.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 2.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical pr... 29 6.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 620 GXPPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXPPPXXXXP 483
G PPPP GG P GGP P PPP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPIT----GGPPPPPPPGGLPP 753
Score = 27.1 bits (57), Expect(2) = 0.14
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 620 GXPPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXPPPXXXXP 483
G PPPP GG P F GGP P PPP P
Sbjct: 756 GGPPPPPPPP--GGCPPPPPPPPPGGFK----GGPPPPPPPGMFAP 795
Score = 25.8 bits (54), Expect(2) = 0.14
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 800 GGXPXPPPPXXXFXLGGGXXXXP 732
GG P PPPP + GG P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 620 GXPPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXPPPXXXXP 483
G PPPP GG P GGP P PPP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPIT----GGPPPPPPPGGLPP 753
Score = 27.1 bits (57), Expect(2) = 0.14
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 620 GXPPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXPPPXXXXP 483
G PPPP GG P F GGP P PPP P
Sbjct: 756 GGPPPPPPPP--GGCPPPPPPPPPGGFK----GGPPPPPPPGMFAP 795
Score = 25.8 bits (54), Expect(2) = 0.14
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 800 GGXPXPPPPXXXFXLGGGXXXXP 732
GG P PPPP + GG P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 620 GXPPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXPPPXXXXP 483
G PPPP GG P GGP P PPP P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPIT----GGPPPPPPPGGLPP 336
Score = 27.1 bits (57), Expect(2) = 0.14
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 620 GXPPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXPPPXXXXP 483
G PPPP GG P F GGP P PPP P
Sbjct: 339 GGPPPPPPPP--GGCPPPPPPPPPGGFK----GGPPPPPPPGMFAP 378
Score = 25.8 bits (54), Expect(2) = 0.14
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 800 GGXPXPPPPXXXFXLGGGXXXXP 732
GG P PPPP + GG P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPP 345
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 614 PPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXPPPXXXXPG 480
PPPP G P F G GG P PPP PG
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/99 (25%), Positives = 27/99 (27%)
Frame = +1
Query: 577 PPPPXXXXXGGGGXPXXLLFFXSXPXPXXXKKKXXGGXXXXXXXXXPXFXFXGXXXXPPP 756
PPPP G G P P P + G P + G PPP
Sbjct: 300 PPPPPGRTPGPPGMP-------GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Query: 757 KXXXXXGGGGXGXPPPXXXXXXXXXFXXXXXXXPPPPXP 873
G G PPP PPPP P
Sbjct: 353 PRYPSAGPGMYPPPPPSRPPAP----PSGHGMIPPPPPP 387
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/107 (26%), Positives = 30/107 (28%), Gaps = 6/107 (5%)
Frame = -1
Query: 800 GGXPXPPPPXXXFXLGGGXXXXPXXXKXGXXXXXKXXXPPXXFFFXXXGXGXEXKK---- 633
G P PPPP + P G PP F G G
Sbjct: 282 GMTPRPPPPPSS-GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Query: 632 -RRXXGXPPPPXXXXXGGG-GXXXPXXXXKXXFXXXGXGGPNPXPPP 498
R G PPPP G G P + G G P PPP
Sbjct: 341 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 614 PPPPXXXXXGGGGXXXPXXXXKXXFXXXGXGGPNPXPPPXXXXPG 480
PPPP G P F G GG P PPP PG
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/99 (25%), Positives = 27/99 (27%)
Frame = +1
Query: 577 PPPPXXXXXGGGGXPXXLLFFXSXPXPXXXKKKXXGGXXXXXXXXXPXFXFXGXXXXPPP 756
PPPP G G P P P + G P + G PPP
Sbjct: 310 PPPPPGRTPGPPGMP-------GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Query: 757 KXXXXXGGGGXGXPPPXXXXXXXXXFXXXXXXXPPPPXP 873
G G PPP PPPP P
Sbjct: 363 PRYPSAGPGMYPPPPPSRPPAP----PSGHGMIPPPPPP 397
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/107 (26%), Positives = 30/107 (28%), Gaps = 6/107 (5%)
Frame = -1
Query: 800 GGXPXPPPPXXXFXLGGGXXXXPXXXKXGXXXXXKXXXPPXXFFFXXXGXGXEXKK---- 633
G P PPPP + P G PP F G G
Sbjct: 292 GMTPRPPPPPSS-GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Query: 632 -RRXXGXPPPPXXXXXGGG-GXXXPXXXXKXXFXXXGXGGPNPXPPP 498
R G PPPP G G P + G G P PPP
Sbjct: 351 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 749 PPPKXXXXXGGGXXXPPXXXXXXXXXXFXXXXXXXXPPPPXPPXXXXFFF 898
PPP GG PP PPPP PP F F
Sbjct: 540 PPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMF 589
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +2
Query: 749 PPPKXXXXXGGGXXXPPXXXXXXXXXXFXXXXXXXXPPPPXPPXXXXFFFFXXK 910
PPP GG PP PPP PP F F K
Sbjct: 539 PPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMFNGK 592
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 433 PPPLFWGGGAXPPFXXXXPPXXXXGGGXPXXF 338
PPP F G G PPF PP G G P F
Sbjct: 307 PPPHFMGRGMPPPF---MPPPPHFGMGPPRGF 335
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 433 PPPLFWGGGAXPPFXXXXPPXXXXGGGXPXXF 338
PPP F G G PPF PP G G P F
Sbjct: 307 PPPHFMGRGMPPPF---MPPPPHFGMGPPRGF 335
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 872 GXGGGGXXXXXXXKXXXXXXXXXGGGXPXPPPPXXXFXLGGG 747
G GGGG GG P PPPP GGG
Sbjct: 84 GCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 125
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -1
Query: 872 GXGGGGXXXXXXXKXXXXXXXXXGGGX-PXPPPPXXXFXLGGG 747
G GGGG GGG P PPPP GGG
Sbjct: 26 GGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 68
>U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical
protein C42D4.3 protein.
Length = 255
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 803 GGGXPXPPPPXXXFXLGGG 747
GGG P PPPP GGG
Sbjct: 32 GGGCPPPPPPMCSGGCGGG 50
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 800 GGXPXPPPPXXXFXLGGGXXXXPXXXKXGXXXXXKXXXPPXXFFFXXXGXGXEXKKRRXX 621
G P PPP F G P G PP R
Sbjct: 736 GFDPNKPPPPM-FQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGH 794
Query: 620 GXPPPPXXXXXGGGG 576
G PPPP GGGG
Sbjct: 795 GGPPPPHFDRRGGGG 809
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,873,544
Number of Sequences: 27780
Number of extensions: 299880
Number of successful extensions: 1241
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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