Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_L10
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 35 0.076
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.18
01_01_0082 + 625198-625719 33 0.31
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.2
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.6
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 30 2.9
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 3.8
01_03_0005 + 11568545-11569119,11569179-11569191 25 4.9
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 29 5.0
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 5.0
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 35.1 bits (77), Expect = 0.076
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNPQXFFIXXLX 347
PP P PP PPPP G G GG P G P P +
Sbjct: 1160 PPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPG--VPGGP 1217
Query: 346 PPXFFXPGGXXXP 308
PP PGG P
Sbjct: 1218 PP---PPGGRGLP 1227
Score = 31.9 bits (69), Expect = 0.71
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +3
Query: 258 P*XGGXGGPPKFFXXXXGXXXPPGKKKXGGXKXXIKNXWGFF-LGGXPXKXGAPPXPXPP 434
P GG GGPP P GG G +GG P GAP P PP
Sbjct: 1152 PPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPP 1211
Query: 435 XXGGG 449
GG
Sbjct: 1212 GVPGG 1216
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPK 383
PP PP PP SPPPP G GG P PPK
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP---PPPK 383
>01_01_0082 + 625198-625719
Length = 173
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPP-KKNPQXFFIXXL 350
PP PP PP PPPP GG G P + P P +F
Sbjct: 69 PPVYYPPPSPPPVAYPPPTTPSTNCPPPP-YGGGGYNPTPSYNPTPGYNPTPSGWFTPPN 127
Query: 349 XPPXFFXPG 323
P PG
Sbjct: 128 MPSYLTPPG 136
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -2
Query: 535 GXXPPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGG--APXFXGXPPKKNPQXF 365
G PP PP PP PPPP G G GG P G P + P F
Sbjct: 346 GSGPPPPP-PPAAPAAPRPPGPGPGP--PPPPGAAGRGGGGPPPPALPGGPRARGPPPF 401
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = +3
Query: 249 GGXP*XGGXGGPPKFFXXXXGXXXPPGKKKXGGXKXXIKNXWGFFLGGXPXKXGAPPXPX 428
G P GG GG P G PG+ GG G LGG + GAP
Sbjct: 170 GRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGG-------GGGLGGGGGEGGAPERVI 222
Query: 429 PPXXGGGGEXXFXXXXGG 482
GGGG GG
Sbjct: 223 GGGGGGGGALKCVVGGGG 240
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +3
Query: 258 P*XGGXGGPPKFFXXXXGXXXPPGKKKXG--GXKXXIKNXWGFFLGGXPXKXGAPPXPXP 431
P GG P + G P G G + + + GG P G P P
Sbjct: 338 PPPSSYGGGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPP 397
Query: 432 PXXGGGGEXXFXXXXGG 482
P GGGG GG
Sbjct: 398 PYHGGGGGGGGGGGGGG 414
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNP 374
PP PP PP PPPP G + F G P P
Sbjct: 433 PPEHPPPPESTSPPPPPTSDPPPVPPPPPTTGSFMPIPSAPFAGLPVPAGP 483
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 24.6 bits (51), Expect(2) = 4.9
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 10/52 (19%)
Frame = -2
Query: 448 PPPXXGGXGXGGAPXFXG-------XPPKKNP--QXF-FIXXLXPPXFFXPG 323
PPP GG G GG G PP NP F F PP F+ G
Sbjct: 114 PPPTGGGGGGGGGWQQGGGGGGAYPTPPPPNPFLPYFPFYYYSPPPPFYSSG 165
Score = 23.0 bits (47), Expect(2) = 4.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 454 SPPPPXXGGXG 422
SPPPP GG G
Sbjct: 92 SPPPPYSGGGG 102
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 451 PPPPXXGGXGXGGAPXFXGXPPKKNP 374
PPPP G G GGAP G P P
Sbjct: 5 PPPPQAGVAGGGGAPPQWGAIPPPVP 30
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 481 PPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPK 383
PP PPPP G G GG + G PP+
Sbjct: 8 PPPPPPPPQHPPPPQAG--GGGGGEFYRGPPPQ 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,144,038
Number of Sequences: 37544
Number of extensions: 200959
Number of successful extensions: 999
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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