Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_L10
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.48
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.48
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.9
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.48
Identities = 23/79 (29%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNPQXFFIXXL- 350
PP P PP PPPP G G P G PP P F +
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP--GPPGMPGMPPPPPPSRFGPPGMG 331
Query: 349 -----XPPXFFXPGGXXXP 308
PP PGG P
Sbjct: 332 GMPPPPPPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.48
Identities = 23/79 (29%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNPQXFFIXXL- 350
PP P PP PPPP G G P G PP P F +
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP--GPPGMPGMPPPPPPSRFGPPGMG 341
Query: 349 -----XPPXFFXPGGXXXP 308
PP PGG P
Sbjct: 342 GMPPPPPPGMRYPGGMPPP 360
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = -2
Query: 508 PPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNPQXFF--IXXLXPPXF 335
PP PP PPPP GG P G PP P I PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP----PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 334 FXPGGXXXP 308
PGG P
Sbjct: 763 PPPGGCPPP 771
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAP 407
PP PP PP PPPP G GG P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 535 GXXPPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXG-XPPKKNPQ 371
G PP P PP PPPP G AP PPKK P+
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = -2
Query: 508 PPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNPQXFF--IXXLXPPXF 335
PP PP PPPP GG P G PP P I PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP----PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 334 FXPGGXXXP 308
PGG P
Sbjct: 763 PPPGGCPPP 771
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAP 407
PP PP PP PPPP G GG P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 535 GXXPPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXG-XPPKKNPQ 371
G PP P PP PPPP G AP PPKK P+
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = -2
Query: 508 PPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNPQXFF--IXXLXPPXF 335
PP PP PPPP GG P G PP P I PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPP----PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Query: 334 FXPGGXXXP 308
PGG P
Sbjct: 346 PPPGGCPPP 354
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAP 407
PP PP PP PPPP G GG P
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 535 GXXPPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXG-XPPKKNPQ 371
G PP P PP PPPP G AP PPKK P+
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 394
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGG--APXFXGXPP 386
PP PP PP PPPP G G P G PP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGG--APXFXGXPP 386
PP PP PP PPPP G G P G PP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = -2
Query: 526 PPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGG--APXFXGXPP 386
PP PP PP PPPP G G P G PP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/76 (34%), Positives = 28/76 (36%)
Frame = +3
Query: 222 PXIGXLXXKGGXP*XGGXGGPPKFFXXXXGXXXPPGKKKXGGXKXXIKNXWGFFLGGXPX 401
P +G G P GG GGPP G PPG GG G +GG P
Sbjct: 156 PLMGGGGDPRGPP--GGMGGPP----GHGGMGGPPGHGGQGGPP----GHGG--MGGPPP 203
Query: 402 KXGAPPXPXPPXXGGG 449
G P P P GG
Sbjct: 204 GQGGPGGPGGPGGPGG 219
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -2
Query: 433 GGXGXGGAPXFXGXPPKKNPQXFFIXXLXPPXFFXPGG 320
GG G G P G P ++ PQ F PP GG
Sbjct: 125 GGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGG 162
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/76 (34%), Positives = 28/76 (36%)
Frame = +3
Query: 222 PXIGXLXXKGGXP*XGGXGGPPKFFXXXXGXXXPPGKKKXGGXKXXIKNXWGFFLGGXPX 401
P +G G P GG GGPP G PPG GG G +GG P
Sbjct: 436 PLMGGGGDPRGPP--GGMGGPP----GHGGMGGPPGHGGQGGPP----GHGG--MGGPPP 483
Query: 402 KXGAPPXPXPPXXGGG 449
G P P P GG
Sbjct: 484 GQGGPGGPGGPGGPGG 499
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -2
Query: 433 GGXGXGGAPXFXGXPPKKNPQXFFIXXLXPPXFFXPGG 320
GG G G P G P ++ PQ F PP GG
Sbjct: 405 GGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGG 442
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 387 GGXPXKXGAPPXPXPPXXGGGGEXXFXXXXGGXXKXXXXGGXXXXGG 527
GG G P P PP GGG GG GG GG
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 90
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 535 GXXPPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPK 383
G PP PP P PPP G G G P G P +
Sbjct: 157 GAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQR 207
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 535 GXXPPXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPK 383
G PP PP P PPP G G G P G P +
Sbjct: 157 GAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQR 207
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -2
Query: 523 PXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNPQXFFIXXLXP 344
P PP PP PPPP G P G PP P F P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP--PPMFGAPPPPP 118
Query: 343 P 341
P
Sbjct: 119 P 119
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Frame = -2
Query: 523 PXXXXPPXXXXXXXPPXXXXXXXSPPPPXXGGXGXGGAPXFXGXPPKKNPQXF---FIXX 353
P P PP +PPPP G G P P K P F F
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAG 754
Query: 352 LXPPXF 335
PP F
Sbjct: 755 APPPPF 760
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,984,518
Number of Sequences: 27780
Number of extensions: 133800
Number of successful extensions: 844
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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