Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L02
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0469 + 14439472-14440905                                         30   2.7  
08_02_0272 + 15189617-15190276,15190361-15191107                       29   4.8  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   6.3  
04_03_0694 + 18781776-18781994,18782475-18782648,18782743-187830...    28   8.4  

>05_03_0469 + 14439472-14440905
          Length = 477

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +1

Query: 499 VTPKTKXARKSPGS--LPPCWKTTEFTSRSCPP 591
           +T  T+ AR  PG+  +PP W+    T+RS PP
Sbjct: 187 LTAVTEFARGVPGAPTVPPVWEREALTTRSWPP 219


>08_02_0272 + 15189617-15190276,15190361-15191107
          Length = 468

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -3

Query: 725 HDVAFVHGGLKVPVVFEGVXGAITVDDTVITRTFRVIELQVLFVLGGHDLEVNSVVF 555
           HD++F HG L++P         + VDDT   + F ++  + L   G +  EV + VF
Sbjct: 300 HDISFRHGALRIP--------RLAVDDTTEHKLFSLMAFEQLHGAGAN--EVTAYVF 346


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 455 GVMVPFVYELDSLLGEDHSKLDG 387
           GVM P + +L  LLGE+++KL G
Sbjct: 13  GVMKPLLSKLTKLLGEEYAKLKG 35


>04_03_0694 +
           18781776-18781994,18782475-18782648,18782743-18783057,
           18783791-18785569,18786334-18786651,18787052-18787105
          Length = 952

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +3

Query: 195 LYMRVVI---GEYAXAIAKCSEYLKEKKGXVIKEAVKRLIENGKRNTMDFAYQLWTKDGK 365
           LY+++++   G Y  A+   S     + G  +KE  K L+E+    T++   +L T  G 
Sbjct: 492 LYLKILLEDLGRYDEALQYISSLEANQAGLTVKEYGKILVEHRPAETVEILLRLCTDGGD 551

Query: 366 EIVK 377
            + +
Sbjct: 552 PMTR 555


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,768,108
Number of Sequences: 37544
Number of extensions: 356236
Number of successful extensions: 945
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)