Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L02
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical pr...    36   0.049
U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    33   0.20 
Z54342-6|CAA91148.1|  459|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical...    30   1.9  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81062-7|CAB02942.1|  755|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z69384-6|CAA93414.3|  499|Caenorhabditis elegans Hypothetical pr...    29   5.7  

>Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical
           protein F15A4.8b protein.
          Length = 808

 Score = 35.5 bits (78), Expect = 0.049
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +1

Query: 496 SVTPKTKXARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPXTP 675
           +VT  T        ++P    TT   S + PP  ++T + +T+      V ST IAP T 
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTM 466

Query: 676 SNTT 687
            +TT
Sbjct: 467 PSTT 470


>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 556 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPXTPSNTTGTLSPPCT 711
           KTT FT+   P P T ST +S T  V   + S+T     TP   T T + P T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEPTT 486


>Z54342-6|CAA91148.1|  459|Caenorhabditis elegans Hypothetical
           protein C08H9.11 protein.
          Length = 459

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
 Frame = +3

Query: 249 EYLKEKKGXVIKEA-----VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVI 407
           +Y KE    V  E      VK ++   K+N +D     WT+   E +KSY  F  + R  
Sbjct: 183 DYYKEYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSA 242

Query: 408 FTEQTVKLINKRDHHALKLI 467
           FTE   K  N+++ + + LI
Sbjct: 243 FTE-LQKRWNRKNEYIISLI 261


>AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical
           protein Y71H2B.1 protein.
          Length = 143

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 195 LYMRVVIGEYAXAIA-KCSEYLKEKKGXVIKEAVKRLIE 308
           LYM+  +G+Y    A KC +Y K+  G    EA++  I+
Sbjct: 87  LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 505 PKTKXARKSPGSLPPCWKTTE--FTSRSCPPRTNST*SSITRKVLVMTVSSTVIA 663
           PKT+     P ++P CW+     F     PPR N+T   I  K       + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472


>Z93391-7|CAB07685.3|  405|Caenorhabditis elegans Hypothetical
           protein W04G5.9 protein.
          Length = 405

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 456 LKLIXQQNHNKIAFGXXXXXXXXXVSWKFTPVLENNRV-YFKIMSTEDKQY 605
           ++ I   N N++ FG         +SW+F   L NN++    I   +D++Y
Sbjct: 285 IRRIRDTNTNEVYFGLVDGADHGTISWRFDKDLNNNKIGRVDIEVRDDEEY 335


>Z81062-7|CAB02942.1|  755|Caenorhabditis elegans Hypothetical
           protein F15A4.8a protein.
          Length = 755

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 559 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPXTPSNTT 687
           TTE  S + PP  ++T + +T+      V ST IAP T  +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433


>Z69384-6|CAA93414.3|  499|Caenorhabditis elegans Hypothetical
           protein T11G6.4 protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 543 TPVL-ENNRVYFKIMSTEDKQYLKLDNTKGS-SDDRIIYGDSTXDTFKHH 686
           TPVL +  R   K+ + EDK  L  D+   S S+D ++  D T    KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,338,003
Number of Sequences: 27780
Number of extensions: 297009
Number of successful extensions: 999
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)