Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_L02
         (865 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.6  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   4.8  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   4.8  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   4.8  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 13/57 (22%), Positives = 29/57 (50%)
 Frame = +3

Query: 177 AVLAEXLYMRVVIGEYAXAIAKCSEYLKEKKGXVIKEAVKRLIENGKRNTMDFAYQL 347
           A+++  +Y+  +I +YA  +   SEYL   +  V +        N ++N +D  +++
Sbjct: 409 ALVSIIMYIAFIILQYAGLLRNRSEYLNHLRANVAEG------RNQRKNVLDRLFRM 459


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 231 AIAKCSEYLKEKKGXVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVK 377
           A+A   +   +K+  VIK+ +K L+EN K    D     +  D K  VK
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN-KPELWDSLANKYDPDKKYRVK 118


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 231 AIAKCSEYLKEKKGXVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP-IQFRVI 407
           A+A   +   +K+  VIK+ +K L+EN          +LW      +   Y P  +FRV 
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVENKP--------ELW----DSLANKYDPDKKFRVK 118

Query: 408 FTEQTVKL 431
           F E+  KL
Sbjct: 119 FEEEAKKL 126


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 231 AIAKCSEYLKEKKGXVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVK 377
           A+A   +   +K+  VIK+ +K L+EN K    D     +  D K  VK
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN-KPELWDSLANKYDPDKKYRVK 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,203
Number of Sequences: 438
Number of extensions: 3486
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)