Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_K23
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1181 - 26732439-26732528,26732883-26732963,26733104-267331... 36 0.041
11_01_0528 - 4148737-4149483,4149618-4150147,4150238-4150736,415... 36 0.041
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 36 0.041
01_07_0387 - 43224718-43224810,43224990-43225070,43225676-432257... 35 0.095
11_01_0531 - 4192567-4193253,4193900-4194427 33 0.29
04_03_0354 + 14830325-14830826,14831491-14832416 31 0.89
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257... 31 1.5
08_02_0607 + 19285580-19286138,19286734-19287668 30 2.0
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 30 2.0
05_01_0258 + 1984666-1984878,1985019-1985852 29 3.6
06_03_0491 - 21383036-21383161,21383246-21383439,21383627-213837... 28 8.3
02_02_0105 + 6810839-6810913,6811005-6811132,6811562-6811764,681... 28 8.3
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 28 8.3
>12_02_1181 -
26732439-26732528,26732883-26732963,26733104-26733163,
26733372-26733451,26733815-26733866,26733987-26734124,
26734203-26734466,26735895-26735952,26736153-26736262,
26736385-26736432,26736812-26736823
Length = 330
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 547 SVKDRIXYRMFLDAXQKGILKPGSQS*XNHI-W*TGIGLALPLLSXG 684
SVKDRI Y M DA +KG++ PG TGIGLA + G
Sbjct: 53 SVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKG 99
>11_01_0528 -
4148737-4149483,4149618-4150147,4150238-4150736,
4152041-4152043
Length = 592
Score = 35.9 bits (79), Expect = 0.041
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 326 VDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPL 463
+DA++G N+ + P IV AL + KV +D+LN G+TPL
Sbjct: 287 LDAQDGDGNTPLHIAVVAGAPGIVNALLQKGKVQTDVLNDDGHTPL 332
>03_05_1124 +
30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 547 SVKDRIXYRMFLDAXQKGILKPGSQS*XNHI-W*TGIGLALPLLSXG 684
SVKDRI Y M DA +KG++ PG TGIGLA + G
Sbjct: 47 SVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKG 93
>01_07_0387 -
43224718-43224810,43224990-43225070,43225676-43225735,
43227129-43227208,43227285-43227336,43227412-43227549,
43227627-43227944,43229381-43229438,43229520-43229629,
43230041-43230280
Length = 409
Score = 34.7 bits (76), Expect = 0.095
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 547 SVKDRIXYRMFLDAXQKGILKPGSQS 624
SVKDRI Y M DA +KG++ PG S
Sbjct: 113 SVKDRIGYSMISDAEEKGLITPGKLS 138
>11_01_0531 - 4192567-4193253,4193900-4194427
Length = 404
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 314 MSNHVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPL 463
M V+A++ N+ + P IV AL R V +D+LN G+TPL
Sbjct: 115 MGGLVNAQDAGGNTPLHLAVVAGAPDIVEALLREGNVQTDVLNDDGHTPL 164
>04_03_0354 + 14830325-14830826,14831491-14832416
Length = 475
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 308 SNMSN-HVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPLGEAI 475
+++SN H+D K L+D+P +VR+ DR+ + + ++V PL A+
Sbjct: 170 ADLSNGHLDTKMDWIPGMPADLRLRDLPSVVRSTDRDDIMFNFFIDVTATMPLASAV 226
>06_01_0358 +
2573241-2573324,2573509-2573636,2573769-2573971,
2574129-2574254,2574522-2574680,2574857-2575050,
2575251-2575376
Length = 339
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 547 SVKDRIXYRMFLDAXQKGILKPG 615
SVKDR RM DA +KG++ PG
Sbjct: 63 SVKDRSALRMIEDAEEKGLISPG 85
>08_02_0607 + 19285580-19286138,19286734-19287668
Length = 497
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 308 SNMSN-HVDAKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILNVIGNTPLGEAI 475
+++SN H+D K L+D+P VR+ DR+ + + ++V PL A+
Sbjct: 189 ADLSNGHLDTKMDWIPGMPADLRLRDLPSFVRSTDRDDIMFNFFIDVTATMPLASAV 245
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 547 SVKDRIXYRMFLDAXQKGILKPG 615
SVKDR RM DA +KG++ PG
Sbjct: 181 SVKDRSALRMIEDAEEKGLITPG 203
>05_01_0258 + 1984666-1984878,1985019-1985852
Length = 348
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 465 VKLSKLPKDEGLKCEMYAKCEFLN 536
VKLSKLP G K E+ AKC +N
Sbjct: 321 VKLSKLPMPAGSKGEIRAKCSAVN 344
>06_03_0491 -
21383036-21383161,21383246-21383439,21383627-21383785,
21383904-21384029,21384290-21384492,21384691-21384818,
21385691-21385783
Length = 342
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 547 SVKDRIXYRMFLDAXQKGILKPG 615
SVKDR M DA +KG++ PG
Sbjct: 66 SVKDRTALSMIEDAEEKGLITPG 88
>02_02_0105 +
6810839-6810913,6811005-6811132,6811562-6811764,
6811829-6811957,6812348-6812506,6812610-6812695,
6812908-6813042
Length = 304
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 547 SVKDRIXYRMFLDAXQKGILKPG 615
SVKDR R+ DA ++G++ PG
Sbjct: 60 SVKDRSALRLIEDAEERGLISPG 82
>01_06_0675 + 31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/85 (23%), Positives = 42/85 (49%)
Frame = +2
Query: 224 KS*IEKLAV*IDTIVNCEF*IQAIKTINSNMSNHVDAKNGTSNSARKFFTLKDMPHIVRA 403
K +E++A DTI + I+ ++ + S N + +NG SN R+ + + + A
Sbjct: 753 KELLEQVASLKDTIARKDMEIEQLQLLKSKSPNSMTDRNG-SNLLRQSTSSTGLSSLPVA 811
Query: 404 LDRNQKVHSDILNVIGNTPLGEAIQ 478
+NQ++ L + +T L +++
Sbjct: 812 SQQNQQLSVVTLTPLADTGLAGSVE 836
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,456,334
Number of Sequences: 37544
Number of extensions: 296496
Number of successful extensions: 563
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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