Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K23
         (854 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024136-1|AAF35961.1|  755|Caenorhabditis elegans Hypothetical ...    45   8e-05
Z72518-3|CAB63415.2|  704|Caenorhabditis elegans Hypothetical pr...    42   7e-04
Z49131-7|CAA88980.3|  704|Caenorhabditis elegans Hypothetical pr...    42   7e-04
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a...    29   3.2  
U64840-4|AAB04962.1|  316|Caenorhabditis elegans Serpentine rece...    29   4.2  
AF016428-1|AAO26001.1|  330|Caenorhabditis elegans Serpentine re...    29   4.2  

>AC024136-1|AAF35961.1|  755|Caenorhabditis elegans Hypothetical
           protein F54A3.4 protein.
          Length = 755

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
 Frame = +3

Query: 465 VKLSKLPKDEGLKCEMYAKCEFLNPG-----RIRQRPHXLPHVSGCXTEGYFEAWQSVIV 629
           VKL  +PK  G++C +Y KCEFLN G     RI ++   +   +G    G      + ++
Sbjct: 350 VKLQHVPKAHGVRCNVYVKCEFLNAGGSTKDRIAKKMVEIAEKTG--KPGALTPGATTLI 407

Query: 630 XPHLVNRN-RTGIAAAVXXYRCIIXXLXKCXM-KSNXLVAXGLKXXXA-XEXAWDSPXXN 800
            P   N      + AAV  Y+C+I    K    KS  L   G        E A++SP  +
Sbjct: 408 EPTSGNTGIGLSLVAAVRGYKCLITMPEKMSKEKSTTLSVLGSTIVRTPNEAAFNSPSSH 467

Query: 801 XXXHXXLK 824
                 LK
Sbjct: 468 IGVALRLK 475


>Z72518-3|CAB63415.2|  704|Caenorhabditis elegans Hypothetical
           protein ZC373.1 protein.
          Length = 704

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
 Frame = +3

Query: 465 VKLSKLPKDEGLKCEMYAKCEFLNPG-----RIRQRPHXLPHVSGCXTEGYFEAWQSVIV 629
           VKL  +PK  G+KC +Y KCE++N G     RI +R   +   +G    G      ++I 
Sbjct: 392 VKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTG--KPGKLVPGVTLIE 449

Query: 630 XPHLVNRNRTGIAAAVXXYRCIIXXLXKCXM-KSNXLVAXGLKXXXA-XEXAWDSPXXNX 803
                      +A+AV  Y+CII    K    KS  + + G        E  +DSP  + 
Sbjct: 450 PTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTIIRTPNEAGFDSPHSHI 509

Query: 804 XXHXXLK 824
                LK
Sbjct: 510 GVALRLK 516


>Z49131-7|CAA88980.3|  704|Caenorhabditis elegans Hypothetical
           protein ZC373.1 protein.
          Length = 704

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
 Frame = +3

Query: 465 VKLSKLPKDEGLKCEMYAKCEFLNPG-----RIRQRPHXLPHVSGCXTEGYFEAWQSVIV 629
           VKL  +PK  G+KC +Y KCE++N G     RI +R   +   +G    G      ++I 
Sbjct: 392 VKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIAKRMVEIAEKTG--KPGKLVPGVTLIE 449

Query: 630 XPHLVNRNRTGIAAAVXXYRCIIXXLXKCXM-KSNXLVAXGLKXXXA-XEXAWDSPXXNX 803
                      +A+AV  Y+CII    K    KS  + + G        E  +DSP  + 
Sbjct: 450 PTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTIIRTPNEAGFDSPHSHI 509

Query: 804 XXHXXLK 824
                LK
Sbjct: 510 GVALRLK 516


>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 80 protein.
          Length = 4900

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 544  LPGLRNSHFAYISHFNPSSLGNLDSFTQW 458
            LP LR +   Y SHF+PS + +L S T +
Sbjct: 4616 LPPLRRTSITYTSHFSPSVIRDLRSSTSF 4644


>U64840-4|AAB04962.1|  316|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 68 protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 308 CLSFLLLVFKIHNSLLYQFTQLAFQFNFFILFN 210
           C  FLL + K++ +  Y+  QLA   N F+  N
Sbjct: 38  CFQFLLGISKVYANSFYRLVQLALLTNTFVYLN 70


>AF016428-1|AAO26001.1|  330|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 66 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 308 CLSFLLLVFKIHNSLLYQFTQLAFQFNFFILFN 210
           C  FLL + K++ +  Y+  QLA   N F+  N
Sbjct: 38  CFQFLLGISKVYANSFYRLVQLALLTNTFVYLN 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,587,636
Number of Sequences: 27780
Number of extensions: 278392
Number of successful extensions: 656
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)