Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K23
         (854 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    59   4e-11
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    24   2.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   8.3  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 59.3 bits (137), Expect = 4e-11
 Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
 Frame = +3

Query: 465 VKLSKLPKDEGLKCEMYAKCEFLNPGRIRQRPHXLPHVSGCXTEGYFEAWQSVIVXPHLV 644
           +KL+ +PK  G+KCE+YAKCEFLNPG   +       +     +G  +   ++I      
Sbjct: 49  IKLNNIPKSYGIKCEIYAKCEFLNPGGSVKDRIAYRMIQDAEDKGLLKPGCTIIEPTSGN 108

Query: 645 NRNRTGIAAAVXXYRCIIXXLXK-CXMKSNXLVAXGLKXXXA-XEXAWDSP 791
                 +AAAV  Y+CII    K    K + L A G K      E +W SP
Sbjct: 109 TGIGLAMAAAVRGYKCIIVMPEKMSDEKISTLYALGAKIIRTPTEASWHSP 159



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 386 PHIVRALDRNQ-KVHSDILNVIGNTPL 463
           PH  R  + +  K+  DIL  IG TPL
Sbjct: 22  PHTCRTKNGDYTKIMPDILTAIGQTPL 48


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 352 VRCAIFSIHMVRHVAVYRFYCLYLKFTIHYCINL 251
           V  ++ + H+  H  VY++ C    +   YC +L
Sbjct: 27  VNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 398 RALDRNQKVHSDILNVIGNTPLG 466
           RA D  Q+VH+ + + +  +P G
Sbjct: 66  RAEDYRQEVHAQVYSCLARSPAG 88


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 325 MVRHVAVYRFYCLYLKFTIHYCINL 251
           M R +A +R + LYL   +  CI++
Sbjct: 110 MCRIMAFFRMFGLYLSSFVLVCISM 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,619
Number of Sequences: 438
Number of extensions: 3168
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)