Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K19
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0487 + 16471538-16471540,16471694-16471795,16471880-164719...   127   1e-29
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460...    53   3e-07
04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590     51   1e-06

>04_03_0487 +
           16471538-16471540,16471694-16471795,16471880-16471908,
           16472619-16472745
          Length = 86

 Score =  127 bits (307), Expect = 1e-29
 Identities = 55/75 (73%), Positives = 62/75 (82%)
 Frame = +3

Query: 108 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPT 287
           L+P    E+ KHK KRLV  PNS+FMDVKC GC+ ITTVFSH+Q VVVC GC T+LCQPT
Sbjct: 10  LNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPT 69

Query: 288 GGRARLTEGCSFRRK 332
           GG+ARLTEGCSFRRK
Sbjct: 70  GGKARLTEGCSFRRK 84


>02_03_0220 +
           16545571-16545573,16545717-16545818,16545980-16546008,
           16549421-16553036
          Length = 1249

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = +3

Query: 108 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHA 236
           L+P    E+ KHK KRLV  PNS+FMDVKC GC+ ++  F  A
Sbjct: 10  LNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNMSVRFDIA 52


>04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590
          Length = 45

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +3

Query: 108 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKI 215
           L+P    E+ KHK KRLV  PNS+FMDVKC GC+ +
Sbjct: 10  LNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFSM 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,842,280
Number of Sequences: 37544
Number of extensions: 228815
Number of successful extensions: 487
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)