Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K18
         (1238 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF118275-1|AAD27584.1|  995|Homo sapiens atrophin-related protei...    31   6.5  

>AF118275-1|AAD27584.1|  995|Homo sapiens atrophin-related protein
           ARP protein.
          Length = 995

 Score = 31.5 bits (68), Expect = 6.5
 Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
 Frame = +2

Query: 617 PAXAXPYSXXXXP-NQT---SQDPPXXXXPXPXXSSXPPXRRPSXXXPXASPXPXLXXXX 784
           PA A P++    P +Q+   SQ PP    P P      P   P    P  +P P L    
Sbjct: 318 PAAAYPHTSLQLPASQSALQSQQPPREQ-PLPPA----PLAMPHIKPPPTTPIPQLPAPQ 372

Query: 785 XHPXXXHISRXXPLRXXTLXXHXPXTXSPXSXFXFXSSXXSXPPLXHXPP 934
            H    H+S   PL   ++  + P    P +     S     PP  H PP
Sbjct: 373 AHKHPPHLSGPSPL---SMNANLP---PPPALKPLSSLSTHHPPSAHPPP 416


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,684,968
Number of Sequences: 237096
Number of extensions: 911127
Number of successful extensions: 3411
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3240
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17614793600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)