Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K18
         (1238 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    29   6.8  
U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical pr...    29   9.0  

>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical protein
            C18D11.4 protein.
          Length = 309

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = -3

Query: 1203 GXGEXGXXFSGGXAXXXGRXRRGRXSXXXDS-GRXWGXXXWEGGGXFRRXGLXGGG 1039
            G G  G  + GG     G  R G       S  R  G     GGG + R G  GGG
Sbjct: 207  GGGGGGDRYGGGGGDRYGGDRYGGGGGRRGSPDRRGGFRSGGGGGGYMRSGGGGGG 262


>Z68760-2|CAA92995.1|  597|Caenorhabditis elegans Hypothetical
           protein F36H1.3 protein.
          Length = 597

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +2

Query: 653 PNQTSQDPPXXXXPXPXXSSXPPXRRPSXXXPXASPXP 766
           P  T   PP    P    ++ PP  +P    P ASP P
Sbjct: 498 PVHTPPAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLP 535


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical protein
            C34D4.11 protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 23/74 (31%), Positives = 24/74 (32%)
 Frame = -3

Query: 1203 GXGEXGXXFSGGXAXXXGRXRRGRXSXXXDSGRXWGXXXWEGGGXFRRXGLXGGGVEXXG 1024
            G G  G    GG +   G   RG        G  WG     G G   R G  GGG    G
Sbjct: 49   GGGGPGWGRGGGGSGWGGG--RGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106

Query: 1023 AAXGXGXTRXLGXG 982
               G G     G G
Sbjct: 107  GGGGRGGGGGGGGG 120



 Score = 29.1 bits (62), Expect = 6.8
 Identities = 21/74 (28%), Positives = 22/74 (29%)
 Frame = -3

Query: 1227 GXGXAXVRGXGEXGXXFSGGXAXXXGRXRRGRXSXXXDSGRXWGXXXWEGGGXFRRXGLX 1048
            G G     G G  G   + G     G    GR       G   G     GGG     G  
Sbjct: 63   GWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRG 122

Query: 1047 GGGVEXXGAAXGXG 1006
            GGG    G   G G
Sbjct: 123  GGGGGRGGGGRGRG 136


>U80023-1|AAG24037.1|  180|Caenorhabditis elegans Hypothetical protein
            F07C4.7 protein.
          Length = 180

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 28/101 (27%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
 Frame = -3

Query: 1203 GXGEXGXXFSGGXAXXXGRXRRGRXSXXXDSGRXWGXXXW-EGGGXFR-RXGLXGGG-VE 1033
            G G  G  F G  +   G    G  +     G   G   W  GGG F    G  GGG   
Sbjct: 21   GPGFGGPGFGGPGSGGPGPRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGG 80

Query: 1032 XXGAAXGXGXTRXLGXGXXSXKXVXEEXDAESXGGXXXXGG 910
              G   G G    L  G    +      D ++ GG    GG
Sbjct: 81   GRGGNGGFGDNGGLRGGNGGGRGGNGGFD-DNGGGRGGNGG 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,312,365
Number of Sequences: 27780
Number of extensions: 115840
Number of successful extensions: 461
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3432936682
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)