Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K16
         (1587 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC1448 Cluster: UPI0000DC1448 related cluster; n...    36   3.0  
UniRef50_Q4A2S6 Cluster: Putative membrane protein precursor; n=...    36   3.9  
UniRef50_Q9LT74 Cluster: Similarity to late embryogenesis abunda...    36   3.9  
UniRef50_A2WJU1 Cluster: Putative uncharacterized protein; n=3; ...    35   5.2  

>UniRef50_UPI0000DC1448 Cluster: UPI0000DC1448 related cluster; n=2;
           Rattus norvegicus|Rep: UPI0000DC1448 UniRef100 entry -
           Rattus norvegicus
          Length = 319

 Score = 35.9 bits (79), Expect = 3.0
 Identities = 22/59 (37%), Positives = 22/59 (37%)
 Frame = -2

Query: 296 PXXPXPPXXLSXCSSPLXXXHSPPXXXSPLXFSXLSPYFIXPQPSXHPXLGPXPPXSPL 120
           P  P PP        PL    SPP   SPL  S  S     P PS      P PP  PL
Sbjct: 125 PPSPSPPSPPPPSPPPLPPSPSPPSLSSPLPPSPPSLSSPPPPPSPSSLSSPLPPPPPL 183


>UniRef50_Q4A2S6 Cluster: Putative membrane protein precursor; n=1;
           Emiliania huxleyi virus 86|Rep: Putative membrane
           protein precursor - Emiliania huxleyi virus 86
          Length = 430

 Score = 35.5 bits (78), Expect = 3.9
 Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
 Frame = -2

Query: 299 SPXXPXPPXXLSXCSSPLXXX-HSPPXXXSPLXFSXLSPYFIXPQPSXHPXLGPXPPXSP 123
           SP  P PP       SP       PP    P      SPY   P P  HP   P PP  P
Sbjct: 146 SPPPPMPPPPTPPPPSPSPPPLPPPPWSPDPSPPPPPSPYMPPPSPPPHPPNQPPPPYPP 205


>UniRef50_Q9LT74 Cluster: Similarity to late embryogenesis abundant
           protein; n=8; Magnoliophyta|Rep: Similarity to late
           embryogenesis abundant protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 631

 Score = 35.5 bits (78), Expect = 3.9
 Identities = 18/55 (32%), Positives = 20/55 (36%)
 Frame = -2

Query: 296 PXXPXPPXXLSXCSSPLXXXHSPPXXXSPLXFSXLSPYFIXPQPSXHPXLGPXPP 132
           P  P PP       SP      PP   +P   S   P    P PS  P + P PP
Sbjct: 204 PVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPP 258


>UniRef50_A2WJU1 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 240

 Score = 35.1 bits (77), Expect = 5.2
 Identities = 21/67 (31%), Positives = 23/67 (34%)
 Frame = -3

Query: 397 VTPXPSLIPRXFXXXPXXXXLXXPXXIX*XXVSPPXXLXPPXXSPSVLPPXTXXTRHPXX 218
           VTP P   P+     P       P  +    VSPP    PP   PS  PP       P  
Sbjct: 80  VTPPPPT-PKKAPPPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPPVAAPAEAPAA 138

Query: 217 XPPFXFP 197
            PP   P
Sbjct: 139 LPPATTP 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,054,430
Number of Sequences: 1657284
Number of extensions: 5441994
Number of successful extensions: 12299
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11302
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 170990497400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)