Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_K13
(857 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1000 - 23220878-23221821,23222164-23223001 66 3e-11
03_02_0187 - 6248226-6249226,6249296-6250148 61 1e-09
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721... 60 2e-09
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348... 48 7e-06
05_01_0121 - 833885-833949,834180-834430,834545-834604,834893-83... 31 0.89
03_05_0799 + 27809301-27811550 31 1.2
02_05_0839 - 32113992-32114210,32114321-32114484,32114612-321147... 30 2.1
02_05_1317 - 35683659-35683756,35683904-35683966,35684068-356841... 29 3.6
01_06_0714 + 31413195-31413221,31414238-31414786 29 3.6
04_03_0980 + 21406822-21409496,21410322-21410376 29 6.3
>07_03_1000 - 23220878-23221821,23222164-23223001
Length = 593
Score = 66.5 bits (155), Expect = 3e-11
Identities = 31/69 (44%), Positives = 38/69 (55%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXL 815
P YPH GL++DT R Y +++IL +DAMA N M VF WHI D FP P L
Sbjct: 185 PLYPHRGLMLDTGRTYFPVADILRTIDAMAANKMNVFHWHITDSQSFPLELPSEPALAEK 244
Query: 816 GPYPXTLIY 842
G Y + Y
Sbjct: 245 GSYGDGMRY 253
Score = 35.9 bits (79), Expect = 0.041
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Frame = +2
Query: 200 IWPRPQMQSIEIPYYKFD-SDVLEIKVMDHDCPILSNAVQRSLAVLRDMLR-IASPYVNR 373
+WP+P S P+ S + + +LS A + + +L + R + +P VN
Sbjct: 35 VWPKPTSMSWAEPHMAVRVSSSFHVVAPSGNAHLLSAARRYAALLLAERYRPLVTPAVNV 94
Query: 374 NAPQQVLDDDTYDGPLKSLSIYLTSPCEEYPHFGMIESYNLTI---AADSTLRSSSIWGI 544
A L L++ ++ H G+ ESY L I A +T+ +++ WG
Sbjct: 95 TAGGAGAGAAGRGAELGYLTLAVSDLHAPLQH-GVDESYALEILPAGAAATVTAATAWGA 153
Query: 545 LRGLESWTHL 574
+RGLE+++ L
Sbjct: 154 MRGLETFSQL 163
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 61.3 bits (142), Expect = 1e-09
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXL 815
P + H G+L+DT+R++ + +IL L AMA N + VF WHI D FP P L
Sbjct: 190 PHFTHRGILLDTARNFYPVRDILHTLRAMAFNKLNVFHWHITDAQSFPIVLPTVPNLANS 249
Query: 816 GPYPXTLIY 842
G Y T+ Y
Sbjct: 250 GSYSPTMRY 258
Score = 32.7 bits (71), Expect = 0.39
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Frame = +2
Query: 173 PEYPASKGAIWPRPQMQSIEIPYYKFDSDVLEIK-VMDHDCPILSNAVQRSLAVLRDMLR 349
P A K +WP+P S Y S ++ V+ H P L AV ++R
Sbjct: 39 PPLLAQKVQVWPKPTSISWPSAVYAPLSPSFSVRAVLSH--PSLRQAVAFYTRLIR---- 92
Query: 350 IASPYVNRNAPQQVLDDDTYDG-PLKSLSIYLTSPCEEYPHFGMI-ESYNLTIAADS--- 514
R+AP + T P+++L++ ++ P + P + ESY L++ DS
Sbjct: 93 -----AERHAPLVPPANYTLSRVPVRTLTLSVSDP--DVPLGPAVDESYTLSVLPDSGSA 145
Query: 515 TLRSSSIWGILRGLESWTHL 574
+ +++ WG +RGLE+++ L
Sbjct: 146 DISAATPWGAIRGLETFSQL 165
>05_04_0319 +
20171486-20171800,20171882-20171956,20172160-20172195,
20172302-20172413,20173082-20173152,20173287-20173417,
20173718-20173783,20174003-20174103,20174311-20174370,
20174463-20174496,20174852-20174950,20175019-20175078,
20175700-20175874,20175900-20175950,20176603-20176632
Length = 471
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +3
Query: 627 TTFPXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXL 806
T P +P+ GLL+DTSRHY + I ++D+M + + V WHIVD FP +P L
Sbjct: 167 TDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYSKLNVLHWHIVDEQSFPIEIPSYPKL 226
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +2
Query: 419 LKSLSIYLTSPCEEYPHFGMIESYNLTIAADST-----LRSSSIWGILRGLESWTHL 574
L +++ + P +E +FG+ ESYNL++ A + + + +++G L LE+++ L
Sbjct: 92 LAGVNVVVHLPGDEL-NFGVDESYNLSVPATGSPIYAQIEAQTVFGALHALETFSQL 147
>01_06_1626 -
38734128-38734160,38734386-38734560,38734819-38734878,
38734961-38735059,38735191-38735224,38735315-38735374,
38735596-38735696,38735949-38736014,38736695-38736825,
38736946-38737038,38737273-38737338,38737459-38737494,
38738308-38738382,38738475-38738792
Length = 448
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = +3
Query: 657 LLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXLGPYPXTL 836
L DTSRHY ++ I ++D MA + + V WHIVD FP +P L G Y +
Sbjct: 170 LHADTSRHYLPVTVIKKVIDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWN-GSYSFSE 228
Query: 837 IYPT 848
Y T
Sbjct: 229 RYTT 232
>05_01_0121 -
833885-833949,834180-834430,834545-834604,834893-834926,
835746-835805,836409-836509,836939-837039,837209-837289,
837580-837650,837738-837849,838138-838173,838865-838951,
839055-839396
Length = 466
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXM 737
P + GLL+DTSRH+ + I ++D+M+ + +
Sbjct: 183 PRFAFRGLLLDTSRHFLPVDVIKQVIDSMSFSKL 216
>03_05_0799 + 27809301-27811550
Length = 749
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 272 KVMDHDCPILSNAVQRSLAVLRDMLRIASPYVNR 373
KV++H P++ A SLAVLR +L + S VNR
Sbjct: 90 KVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNR 123
>02_05_0839 -
32113992-32114210,32114321-32114484,32114612-32114708,
32115822-32115944,32116770-32117141
Length = 324
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 233 IPYYKFDSDVLEIKVMDHDCPILSNAVQRSLAVLRD-MLRIASPYVNRNAPQQVLDDDTY 409
IPYY FD V +++ + SN V+R ++ LRD + R P + P +V+ +
Sbjct: 143 IPYYSFDQFVRKVEKVG-----ASNRVRRCVSELRDRVARGGDPTLLHEPPVEVIPEGEP 197
Query: 410 DG 415
DG
Sbjct: 198 DG 199
>02_05_1317 -
35683659-35683756,35683904-35683966,35684068-35684182,
35684385-35684486,35684687-35684756,35684878-35684952,
35685188-35685279,35685386-35685493,35685560-35685640,
35685728-35685771,35685858-35685984
Length = 324
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 398 HLRPVVGHCGLHTDSRFGA 342
HL P V HCG H++ FGA
Sbjct: 117 HLLPGVYHCGYHSEDSFGA 135
>01_06_0714 + 31413195-31413221,31414238-31414786
Length = 191
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 271 NFKYITIKFVVRNFYRLHLRSWPNCTF 191
NF ++ + +R RL +R WPNC F
Sbjct: 76 NFAWLLLHNRLRTADRLQIRQWPNCYF 102
>04_03_0980 + 21406822-21409496,21410322-21410376
Length = 909
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 238 RNFYRLHLRSWPNCTFRCWIFGSRFHDMQTGH 143
+N LHLRS P F ++ S F D++T H
Sbjct: 734 QNLQHLHLRSCPRLQFVLPVWASSFPDLKTLH 765
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,633,586
Number of Sequences: 37544
Number of extensions: 405983
Number of successful extensions: 882
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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