Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K13
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   3.9  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   6.8  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 401  DTYDGPLKSLSIYLTSPCEEYPHFGMIE-SYNLTIAADSTLRSSSIWGI-LRGLESWTH 571
            D  DGP  S+  Y      E  HFG+   S++LT+  +      S++ + ++  E  T+
Sbjct: 1420 DPLDGPAASVVCYYIVHGNEDGHFGLDPVSHDLTVEKELDREKKSLYKLHIKATEECTN 1478


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = -2

Query: 382  WGIAVYIRTRDSEHVSQYRQTPLDGIRQNRTIVIHYLNFKYIT 254
            +GI +Y++ R+ E +S   +    G  +   I I+ L+ +++T
Sbjct: 916  YGIRIYVKYRNEEKLSALDRKLQSGGERAVAIAIYTLSLQHMT 958


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 464  DILHRVMSSKCLDSSVVRRMYHHLRPV 384
            D + RV++ KC +   +RR  H + P+
Sbjct: 1696 DGVTRVVTLKCANGKEIRRPIHRIAPL 1722


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,252
Number of Sequences: 2352
Number of extensions: 16051
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)