Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_K13
(857 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62076-1|AAD13932.1| 529|Homo sapiens HEXA protein. 83 1e-15
M16424-1|AAB00965.1| 529|Homo sapiens HEXA protein. 83 1e-15
M13520-1|AAA51827.1| 490|Homo sapiens HEXA protein. 83 1e-15
BC084537-1|AAH84537.1| 529|Homo sapiens hexosaminidase A (alpha... 83 1e-15
BC018927-1|AAH18927.1| 529|Homo sapiens hexosaminidase A (alpha... 83 1e-15
BC001138-1|AAH01138.2| 409|Homo sapiens HEXA protein protein. 83 1e-15
AK222502-1|BAD96222.1| 529|Homo sapiens hexosaminidase A prepro... 83 1e-15
M23294-1|AAA52645.1| 556|Homo sapiens beta-hexosaminidase beta-... 73 1e-12
M19735-1|AAA68620.1| 544|Homo sapiens beta-hexosaminidase beta-... 73 1e-12
M13519-1|AAA51828.1| 572|Homo sapiens HEXB protein. 73 1e-12
BT009919-1|AAP88921.1| 556|Homo sapiens hexosaminidase B (beta ... 73 1e-12
BC017378-1|AAH17378.1| 556|Homo sapiens hexosaminidase B (beta ... 73 1e-12
AF378118-1|AAM46114.1| 556|Homo sapiens cervical cancer proto-o... 73 1e-12
M34906-1|AAA51829.1| 58|Homo sapiens beta-hexosaminidase beta-... 41 0.005
AY643499-1|AAV48875.1| 331|Homo sapiens ENC-1AS protein. 41 0.005
>S62076-1|AAD13932.1| 529|Homo sapiens HEXA protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 633 FPXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXX 812
FP +PH GLL+DTSRHY +S+IL LD MA N + VF WH+VD FPY FP L
Sbjct: 164 FPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR 223
Query: 813 LGPY-PXTLIY 842
G Y P T IY
Sbjct: 224 KGSYNPVTHIY 234
Score = 51.6 bits (118), Expect = 4e-06
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 197 AIWPRPQ-MQSIEIPY------YKFDSDVLEIKVMDHDCPILSNAVQRSLAVLRDMLRIA 355
A+WP PQ Q+ + Y ++F DV C +L A QR RD+L
Sbjct: 22 ALWPWPQNFQTSDQRYVLYPNNFQFQYDVSS--AAQPGCSVLDEAFQR----YRDLL--- 72
Query: 356 SPYVNRNAPQQVLDDDTYDGPLKSLSIYLTSP-CEEYPHFGMIESYNLTIAADSTLR-SS 529
+ + + P+ L + L + + +P C + P +E+Y LTI D L S
Sbjct: 73 --FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLLSE 130
Query: 530 SIWGILRGLESWTHLXHLSDXRDPLHINXGXVHDFPXLP 646
++WG LRGLE+++ L S IN + DFP P
Sbjct: 131 TVWGALRGLETFSQLVWKS-AEGTFFINKTEIEDFPRFP 168
>M16424-1|AAB00965.1| 529|Homo sapiens HEXA protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 633 FPXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXX 812
FP +PH GLL+DTSRHY +S+IL LD MA N + VF WH+VD FPY FP L
Sbjct: 164 FPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR 223
Query: 813 LGPY-PXTLIY 842
G Y P T IY
Sbjct: 224 KGSYNPVTHIY 234
Score = 51.6 bits (118), Expect = 4e-06
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 197 AIWPRPQ-MQSIEIPY------YKFDSDVLEIKVMDHDCPILSNAVQRSLAVLRDMLRIA 355
A+WP PQ Q+ + Y ++F DV C +L A QR RD+L
Sbjct: 22 ALWPWPQNFQTSDQRYVLYPNNFQFQYDVSS--AAQPGCSVLDEAFQR----YRDLL--- 72
Query: 356 SPYVNRNAPQQVLDDDTYDGPLKSLSIYLTSP-CEEYPHFGMIESYNLTIAADSTLR-SS 529
+ + + P+ L + L + + +P C + P +E+Y LTI D L S
Sbjct: 73 --FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLLSE 130
Query: 530 SIWGILRGLESWTHLXHLSDXRDPLHINXGXVHDFPXLP 646
++WG LRGLE+++ L S IN + DFP P
Sbjct: 131 TVWGALRGLETFSQLVWKS-AEGTFFINKTEIEDFPRFP 168
>M13520-1|AAA51827.1| 490|Homo sapiens HEXA protein.
Length = 490
Score = 83.0 bits (196), Expect = 1e-15
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 633 FPXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXX 812
FP +PH GLL+DTSRHY +S+IL LD MA N + VF WH+VD FPY FP L
Sbjct: 125 FPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR 184
Query: 813 LGPY-PXTLIY 842
G Y P T IY
Sbjct: 185 KGSYNPVTHIY 195
Score = 48.4 bits (110), Expect = 3e-05
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 290 CPILSNAVQRSLAVLRDMLRIASPYVNRNAPQQVLDDDTYDGPLKSLSIYLTSP-CEEYP 466
C +L A QR RD+L + + + P+ L + L + + +P C + P
Sbjct: 19 CSVLDEAFQR----YRDLL-----FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLP 69
Query: 467 HFGMIESYNLTIAADSTLR-SSSIWGILRGLESWTHLXHLSDXRDPLHINXGXVHDFPXL 643
+E+Y LTI D L S ++WG LRGLE+++ L S IN + DFP
Sbjct: 70 TLESVENYTLTINDDQCLLLSETVWGALRGLETFSQLVWKS-AEGTFFINKTEIEDFPRF 128
Query: 644 P 646
P
Sbjct: 129 P 129
>BC084537-1|AAH84537.1| 529|Homo sapiens hexosaminidase A (alpha
polypeptide) protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 633 FPXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXX 812
FP +PH GLL+DTSRHY +S+IL LD MA N + VF WH+VD FPY FP L
Sbjct: 164 FPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR 223
Query: 813 LGPY-PXTLIY 842
G Y P T IY
Sbjct: 224 KGSYNPVTHIY 234
Score = 51.6 bits (118), Expect = 4e-06
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 197 AIWPRPQ-MQSIEIPY------YKFDSDVLEIKVMDHDCPILSNAVQRSLAVLRDMLRIA 355
A+WP PQ Q+ + Y ++F DV C +L A QR RD+L
Sbjct: 22 ALWPWPQNFQTSDQRYVLYPNNFQFQYDVSS--AAQPGCSVLDEAFQR----YRDLL--- 72
Query: 356 SPYVNRNAPQQVLDDDTYDGPLKSLSIYLTSP-CEEYPHFGMIESYNLTIAADSTLR-SS 529
+ + + P+ L + L + + +P C + P +E+Y LTI D L S
Sbjct: 73 --FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLLSE 130
Query: 530 SIWGILRGLESWTHLXHLSDXRDPLHINXGXVHDFPXLP 646
++WG LRGLE+++ L S IN + DFP P
Sbjct: 131 TVWGALRGLETFSQLVWKS-AEGTFFINKTEIEDFPRFP 168
>BC018927-1|AAH18927.1| 529|Homo sapiens hexosaminidase A (alpha
polypeptide) protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 633 FPXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXX 812
FP +PH GLL+DTSRHY +S+IL LD MA N + VF WH+VD FPY FP L
Sbjct: 164 FPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR 223
Query: 813 LGPY-PXTLIY 842
G Y P T IY
Sbjct: 224 KGSYNPVTHIY 234
Score = 51.6 bits (118), Expect = 4e-06
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 197 AIWPRPQ-MQSIEIPY------YKFDSDVLEIKVMDHDCPILSNAVQRSLAVLRDMLRIA 355
A+WP PQ Q+ + Y ++F DV C +L A QR RD+L
Sbjct: 22 ALWPWPQNFQTSDQRYVLYPNNFQFQYDVSS--AAQPGCSVLDEAFQR----YRDLL--- 72
Query: 356 SPYVNRNAPQQVLDDDTYDGPLKSLSIYLTSP-CEEYPHFGMIESYNLTIAADSTLR-SS 529
+ + + P+ L + L + + +P C + P +E+Y LTI D L S
Sbjct: 73 --FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLLSE 130
Query: 530 SIWGILRGLESWTHLXHLSDXRDPLHINXGXVHDFPXLP 646
++WG LRGLE+++ L S IN + DFP P
Sbjct: 131 TVWGALRGLETFSQLVWKS-AEGTFFINKTEIEDFPRFP 168
>BC001138-1|AAH01138.2| 409|Homo sapiens HEXA protein protein.
Length = 409
Score = 83.0 bits (196), Expect = 1e-15
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 633 FPXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXX 812
FP +PH GLL+DTSRHY +S+IL LD MA N + VF WH+VD FPY FP L
Sbjct: 44 FPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR 103
Query: 813 LGPY-PXTLIY 842
G Y P T IY
Sbjct: 104 KGSYNPVTHIY 114
Score = 34.3 bits (75), Expect = 0.58
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 518 LRSSSIWGILRGLESWTHLXHLSDXRDPLHINXGXVHDFPXLP 646
L S ++WG LRGLE+++ L S IN + DFP P
Sbjct: 7 LLSETVWGALRGLETFSQLVWKS-AEGTFFINKTEIEDFPRFP 48
>AK222502-1|BAD96222.1| 529|Homo sapiens hexosaminidase A
preproprotein variant protein.
Length = 529
Score = 83.0 bits (196), Expect = 1e-15
Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 633 FPXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXX 812
FP +PH GLL+DTSRHY +S+IL LD MA N + VF WH+VD FPY FP L
Sbjct: 164 FPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMR 223
Query: 813 LGPY-PXTLIY 842
G Y P T IY
Sbjct: 224 KGSYNPVTHIY 234
Score = 51.6 bits (118), Expect = 4e-06
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 197 AIWPRPQ-MQSIEIPY------YKFDSDVLEIKVMDHDCPILSNAVQRSLAVLRDMLRIA 355
A+WP PQ Q+ + Y ++F DV C +L A QR RD+L
Sbjct: 22 ALWPWPQNFQTSDQRYVLYPNNFQFQYDVSS--AAQPGCSVLDEAFQR----YRDLL--- 72
Query: 356 SPYVNRNAPQQVLDDDTYDGPLKSLSIYLTSP-CEEYPHFGMIESYNLTIAADSTLR-SS 529
+ + + P+ L + L + + +P C + P +E+Y LTI D L S
Sbjct: 73 --FGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGCNQLPTLESVENYTLTINDDQCLLLSE 130
Query: 530 SIWGILRGLESWTHLXHLSDXRDPLHINXGXVHDFPXLP 646
++WG LRGLE+++ L S IN + DFP P
Sbjct: 131 TVWGALRGLETFSQLVWKS-AEGTFFINKTEIEDFPRFP 168
>M23294-1|AAA52645.1| 556|Homo sapiens beta-hexosaminidase
beta-subunit protein.
Length = 556
Score = 73.3 bits (172), Expect = 1e-12
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXL 815
P + H G+L+DTSRHY + IL LDAMA N V WHIVD FPY FP L
Sbjct: 198 PRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNK 257
Query: 816 GPYPXTLIY 842
G Y + +Y
Sbjct: 258 GSYSLSHVY 266
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 428 LSIYLTSPCEEYPHFGMIESYNLTIAAD-STLRSSSIWGILRGLESWTHLXHLSDXRDPL 604
+SI L S C+ +P+ ESY L + + L+++ +WG LRGLE+++ L + D
Sbjct: 129 VSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVY-QDSYGTF 187
Query: 605 HINXGXVHDFP 637
IN + D P
Sbjct: 188 TINESTIIDSP 198
>M19735-1|AAA68620.1| 544|Homo sapiens beta-hexosaminidase
beta-subunit protein.
Length = 544
Score = 73.3 bits (172), Expect = 1e-12
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXL 815
P + H G+L+DTSRHY + IL LDAMA N V WHIVD FPY FP L
Sbjct: 186 PRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNK 245
Query: 816 GPYPXTLIY 842
G Y + +Y
Sbjct: 246 GSYSLSHVY 254
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 428 LSIYLTSPCEEYPHFGMIESYNLTIAAD-STLRSSSIWGILRGLESWTHLXHLSDXRDPL 604
+SI L S C+ +P+ ESY L + + L+++ +WG LRGLE+++ L + D
Sbjct: 117 VSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVY-QDSYGTF 175
Query: 605 HINXGXVHDFP 637
IN + D P
Sbjct: 176 TINESTIIDSP 186
>M13519-1|AAA51828.1| 572|Homo sapiens HEXB protein.
Length = 572
Score = 73.3 bits (172), Expect = 1e-12
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXL 815
P + H G+L+DTSRHY + IL LDAMA N V WHIVD FPY FP L
Sbjct: 214 PRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNK 273
Query: 816 GPYPXTLIY 842
G Y + +Y
Sbjct: 274 GSYSLSHVY 282
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 428 LSIYLTSPCEEYPHFGMIESYNLTIAAD-STLRSSSIWGILRGLESWTHLXHLSDXRDPL 604
+SI L S C+ +P+ ESY L + + L+++ +WG LRGLE+++ L + D
Sbjct: 145 VSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVY-QDSYGTF 203
Query: 605 HINXGXVHDFP 637
IN + D P
Sbjct: 204 TINESTIIDSP 214
>BT009919-1|AAP88921.1| 556|Homo sapiens hexosaminidase B (beta
polypeptide) protein.
Length = 556
Score = 73.3 bits (172), Expect = 1e-12
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXL 815
P + H G+L+DTSRHY + IL LDAMA N V WHIVD FPY FP L
Sbjct: 198 PRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNK 257
Query: 816 GPYPXTLIY 842
G Y + +Y
Sbjct: 258 GSYSLSHVY 266
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 428 LSIYLTSPCEEYPHFGMIESYNLTIAAD-STLRSSSIWGILRGLESWTHLXHLSDXRDPL 604
+SI L S C+ +P+ ESY L + + L+++ +WG LRGLE+++ L + D
Sbjct: 129 VSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVY-QDSYGTF 187
Query: 605 HINXGXVHDFP 637
IN + D P
Sbjct: 188 TINESTIIDSP 198
>BC017378-1|AAH17378.1| 556|Homo sapiens hexosaminidase B (beta
polypeptide) protein.
Length = 556
Score = 73.3 bits (172), Expect = 1e-12
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXL 815
P + H G+L+DTSRHY + IL LDAMA N V WHIVD FPY FP L
Sbjct: 198 PRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNK 257
Query: 816 GPYPXTLIY 842
G Y + +Y
Sbjct: 258 GSYSLSHVY 266
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 428 LSIYLTSPCEEYPHFGMIESYNLTIAAD-STLRSSSIWGILRGLESWTHLXHLSDXRDPL 604
+SI L S C+ +P+ ESY L + + L+++ +WG LRGLE+++ L + D
Sbjct: 129 VSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVY-QDSYGTF 187
Query: 605 HINXGXVHDFP 637
IN + D P
Sbjct: 188 TINESTIIDSP 198
>AF378118-1|AAM46114.1| 556|Homo sapiens cervical cancer
proto-oncogene 7 protein.
Length = 556
Score = 73.3 bits (172), Expect = 1e-12
Identities = 33/69 (47%), Positives = 39/69 (56%)
Frame = +3
Query: 636 PXYPHXGLLVDTSRHYXSMSNILLILDAMAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXL 815
P + H G+L+DTSRHY + IL LDAMA N V WHIVD FPY FP L
Sbjct: 198 PRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNK 257
Query: 816 GPYPXTLIY 842
G Y + +Y
Sbjct: 258 GSYSLSHVY 266
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 428 LSIYLTSPCEEYPHFGMIESYNLTIAAD-STLRSSSIWGILRGLESWTHLXHLSDXRDPL 604
+SI L S C+ +P+ ESY L + + L+++ +WG LRGLE+++ L + D
Sbjct: 129 VSITLQSECDAFPNISSDESYTLLVKEPVAVLKANRVWGALRGLETFSQLVY-QDSYGTF 187
Query: 605 HINXGXVHDFP 637
IN + D P
Sbjct: 188 TINESTIIDSP 198
>M34906-1|AAA51829.1| 58|Homo sapiens beta-hexosaminidase
beta-subunit protein.
Length = 58
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 720 MAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXLGPYPXTLIY 842
MA N V WHIVD FPY FP L G Y + +Y
Sbjct: 1 MAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVY 41
>AY643499-1|AAV48875.1| 331|Homo sapiens ENC-1AS protein.
Length = 331
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 720 MAMNXMXVFXWHIVDXXXFPYXXXRFPXLXXLGPYPXTLIY 842
MA N V WHIVD FPY FP L G Y + +Y
Sbjct: 1 MAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVY 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,339,146
Number of Sequences: 237096
Number of extensions: 2129567
Number of successful extensions: 4155
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4143
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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