Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K12
         (998 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_1022 - 21778315-21779007                                         26   1.9  
09_02_0543 + 10427321-10428315,10428440-10429154                       30   2.5  
06_01_0486 - 3455030-3455770                                           30   3.3  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    29   4.4  
08_02_1197 + 25199614-25199795,25200241-25200308,25200309-252004...    29   5.8  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   5.8  
02_02_0015 + 6109552-6109650,6110006-6110078,6111937-6111998,611...    29   5.8  
01_01_0250 + 2052599-2053358,2053581-2053604,2054813-2054848,205...    29   5.8  

>04_03_1022 - 21778315-21779007
          Length = 230

 Score = 25.8 bits (54), Expect(2) = 1.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 923 RPXXTNXHLXSPPPSXPP 976
           RP  ++ HL  PPP  PP
Sbjct: 26  RPPCSSAHLLPPPPPPPP 43



 Score = 23.4 bits (48), Expect(2) = 1.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 956 PPPSXPPXLXPP 991
           PPP  PP L PP
Sbjct: 44  PPPYVPPHLLPP 55


>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +1

Query: 751 PPXPLSPHXVHXPPTPLXSXQPXXPSDPSXTXAXPXFHNTXPGXHS 888
           PP P +P     PPTP     P  P  P  T          P  HS
Sbjct: 35  PPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAAAPSPHS 80


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 923 RPXXTNXHLXSPPPSXPPXLXPP 991
           RP  T  ++ SPPP  PP + PP
Sbjct: 85  RPPPTPPYVPSPPPYVPPYIPPP 107


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
 Frame = +1

Query: 751 PPXPLSP---HXVHXPPTPLXSXQPXXPSDPSXTXAXP 855
           PP P  P   H +  PP PL    P  P+  S T A P
Sbjct: 76  PPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPP 113


>08_02_1197 +
           25199614-25199795,25200241-25200308,25200309-25200400,
           25200940-25201019,25201418-25201535,25202371-25202562
          Length = 243

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 173 VDLVLNNWTALQLAVEHGMGAPGGEKTAQLMAVXI 277
           + LV   WTALQ+AVE+  G       A  +A  I
Sbjct: 24  IGLVFGRWTALQMAVENQWGGRDSRAKADQLAESI 58


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +1

Query: 751  PPXPLSPH-XVHXPPTPLXSXQPXXPSDPSXTXAXP 855
            PP PLSP      PP PL S  P  P+ P      P
Sbjct: 1171 PPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPP 1206


>02_02_0015 +
           6109552-6109650,6110006-6110078,6111937-6111998,
           6112315-6112376,6112463-6112556,6112673-6113227,
           6113379-6113870,6113967-6114137,6115713-6115817,
           6115903-6116052,6116372-6116498,6116585-6116648,
           6117147-6117203,6117423-6117555,6117660-6117746
          Length = 776

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 745 LXPPXPLSPHXVHXPPTPLXSXQPXXPSDPSXT 843
           + PP P+ P     PP P+   +P  P  P+ T
Sbjct: 273 IDPPRPIDPPRPIDPPRPIDPPRPIDPPRPNGT 305


>01_01_0250 +
           2052599-2053358,2053581-2053604,2054813-2054848,
           2055047-2056284
          Length = 685

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +2

Query: 224 GMGAPGGEKTAQLMAVXIXRYCVENV-VDXXELAEVIEDL 340
           G G+PGGE+ A+ MA+ I  +C++ V  +   + +V+E L
Sbjct: 606 GAGSPGGEEIARKMAL-IGLWCIQTVPANRPSMGKVLEML 644


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,853
Number of Sequences: 37544
Number of extensions: 232803
Number of successful extensions: 1392
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2928685000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)