Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K08
         (864 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical...    28   7.5  

>U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical
           protein C30G12.1 protein.
          Length = 469

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 217 TTTLMETATNLSTTVXITWTVPKADLTSSLPLS 315
           TTT M T T  ST +  T T P+     ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326


>AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical
           protein Y73E7A.8 protein.
          Length = 707

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 187 PPXTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSSLP 309
           PP T+  L  TTT  +T T  +TT   T T P+   T++ P
Sbjct: 355 PPTTTTTLQTTTTRPQT-TKTTTTPQTTTTRPQTTKTTTTP 394


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,965,041
Number of Sequences: 27780
Number of extensions: 182790
Number of successful extensions: 464
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)