Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K07
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038606-4|AAB92026.1|  331|Caenorhabditis elegans Hypothetical ...    29   3.3  
AF038606-3|AAX55701.1|  393|Caenorhabditis elegans Hypothetical ...    29   3.3  
AF038606-2|AAX55700.1|  404|Caenorhabditis elegans Hypothetical ...    29   3.3  
AB182367-3|BAD23998.1|  331|Caenorhabditis elegans hypothetical ...    29   3.3  
AB182367-2|BAD23997.1|  393|Caenorhabditis elegans hypothetical ...    29   3.3  
AB182367-1|BAD23996.1|  404|Caenorhabditis elegans hypothetical ...    29   3.3  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>AF038606-4|AAB92026.1|  331|Caenorhabditis elegans Hypothetical
           protein C04C3.5a protein.
          Length = 331

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = +3

Query: 498 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYD 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYE 150


>AF038606-3|AAX55701.1|  393|Caenorhabditis elegans Hypothetical
           protein C04C3.5c protein.
          Length = 393

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = +3

Query: 498 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYD 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYE 212


>AF038606-2|AAX55700.1|  404|Caenorhabditis elegans Hypothetical
           protein C04C3.5b protein.
          Length = 404

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = +3

Query: 498 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYD 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYE 223


>AB182367-3|BAD23998.1|  331|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 331

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = +3

Query: 498 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYD 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYE 150


>AB182367-2|BAD23997.1|  393|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 393

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = +3

Query: 498 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYD 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYE 212


>AB182367-1|BAD23996.1|  404|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 404

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = +3

Query: 498 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYD 614
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYE 223


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 458 GGPCGAPRPCARCSASTVPKPP 393
           GG CG P PC   + + V  PP
Sbjct: 65  GGGCGGPAPCGGAAPAYVAPPP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,265,922
Number of Sequences: 27780
Number of extensions: 203640
Number of successful extensions: 838
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)