Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_K06
(1028 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.26
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.80
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 4.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 5.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 9.9
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.1 bits (67), Expect = 0.26
Identities = 24/92 (26%), Positives = 25/92 (27%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXX 745
P P P P P + PG PP P P PM P PP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGE----HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 746 TAXPHXPXXPTPXXGTHXHRRXPPXPPSXHPP 841
P P PP PP H P
Sbjct: 264 MHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEP 294
Score = 31.1 bits (67), Expect = 0.26
Identities = 24/92 (26%), Positives = 25/92 (27%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXX 745
P P P P P + PG PP P P PM P PP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGE----HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Query: 746 TAXPHXPXXPTPXXGTHXHRRXPPXPPSXHPP 841
P P PP PP H P
Sbjct: 277 MHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEP 307
Score = 31.1 bits (67), Expect = 0.26
Identities = 24/92 (26%), Positives = 25/92 (27%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXX 745
P P P P P + PG PP P P PM P PP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGE----HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Query: 746 TAXPHXPXXPTPXXGTHXHRRXPPXPPSXHPP 841
P P PP PP H P
Sbjct: 290 MHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEP 320
Score = 31.1 bits (67), Expect = 0.26
Identities = 24/92 (26%), Positives = 25/92 (27%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXX 745
P P P P P + PG PP P P PM P PP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGE----HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Query: 746 TAXPHXPXXPTPXXGTHXHRRXPPXPPSXHPP 841
P P PP PP H P
Sbjct: 303 MHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEP 333
Score = 28.7 bits (61), Expect = 1.4
Identities = 22/90 (24%), Positives = 23/90 (25%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXX 745
P P P P P + PG PP P P PM P PP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGE----HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Query: 746 TAXPHXPXXPTPXXGTHXHRRXPPXPPSXH 835
P P PP P H
Sbjct: 316 MHHEPGEHMPPPPMHHEPGEHMPPPPFKHH 345
Score = 27.9 bits (59), Expect = 2.5
Identities = 20/75 (26%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Frame = +2
Query: 620 RXXPGHPRTXXFPPXPXTPXXQXXH-PXTPMQAXPXXPHPPXXTAXPHXPXXPTPXXGTH 796
R P H P P H P PM P PP P P
Sbjct: 195 REFPAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 254
Query: 797 XHRRXPPXPPSXHPP 841
PP PP H P
Sbjct: 255 PGEHMPP-PPMHHEP 268
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 4/41 (9%)
Frame = +1
Query: 730 PPPEXHXXPAXPXXP----HXXXRHPXPPPXAPXPSLXXPP 840
PPP H P P H H PPP P PP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 339
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.80
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXX 745
P P P AP++ P P P P P P P P P P
Sbjct: 599 PEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAA-PVVP--EVPSVPQRPAV 655
Query: 746 TAXPHXPXXPTP 781
P P P P
Sbjct: 656 PVVPEAPSVPQP 667
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/72 (23%), Positives = 20/72 (27%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXX 745
P PS P + P P+ P P P + P P PP
Sbjct: 611 PVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAA 670
Query: 746 TAXPHXPXXPTP 781
P P P P
Sbjct: 671 PVVPEVPSVPQP 682
Score = 27.9 bits (59), Expect = 2.5
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXX 745
P P P AP++ P P P P P P P P P P
Sbjct: 569 PEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVA-PVAP--EVPSVPQRPAV 625
Query: 746 TAXPHXPXXPTP 781
P P P P
Sbjct: 626 PVVPEAPSVPQP 637
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/72 (25%), Positives = 18/72 (25%)
Frame = +2
Query: 560 SXPTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPP 739
S P P P PQ P P P P P A P P P
Sbjct: 603 SVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAP 662
Query: 740 XXTAXPHXPXXP 775
P P P
Sbjct: 663 SVPQPPAAPVVP 674
Score = 27.1 bits (57), Expect = 4.3
Identities = 18/72 (25%), Positives = 18/72 (25%)
Frame = +2
Query: 560 SXPTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPP 739
S P P P PQ P P P P P A P P P
Sbjct: 573 SVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAP 632
Query: 740 XXTAXPHXPXXP 775
P P P
Sbjct: 633 SVPQPPAAPVVP 644
Score = 26.2 bits (55), Expect = 7.5
Identities = 18/72 (25%), Positives = 18/72 (25%)
Frame = +2
Query: 560 SXPTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPP 739
S P P P PQ P P P P P A P P P
Sbjct: 588 SVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVP 647
Query: 740 XXTAXPHXPXXP 775
P P P
Sbjct: 648 SVPQRPAVPVVP 659
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/73 (27%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +2
Query: 629 PGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXXT--AXPHXPXXPTPXXGTHXH 802
P P P P P P P+ P P PP A P P P P
Sbjct: 732 PPPPPPAVIVPTP-APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 803 RRXPPXPPSXHPP 841
R P P + P
Sbjct: 791 RYYAPAPQAEPEP 803
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 566 PTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTP 676
P P P+PI GP P PG PP P P
Sbjct: 748 PIPVPPPAPIMGGPPPP-PPPPGVAGAGPPPPPPPPP 783
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 3.2
Identities = 21/92 (22%), Positives = 28/92 (30%)
Frame = +2
Query: 560 SXPTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPP 739
S P P +P+ + P+ P PP P + P P H P
Sbjct: 170 SLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
Query: 740 XXTAXPHXPXXPTPXXGTHXHRRXPPXPPSXH 835
T+ P P PP PPS +
Sbjct: 230 NVTS--ESPKFPNRGPSI-PSASVPPVPPSSY 258
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 730 PPPEXHXXPAXPXXPHXXXRHPXPPPX-APXPSLXXPP 840
PPP + + P P P PPP AP PP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 25.8 bits (54), Expect = 9.9
Identities = 23/95 (24%), Positives = 28/95 (29%), Gaps = 2/95 (2%)
Frame = +2
Query: 560 SXPTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPX--TPMQAXPXXPH 733
S P P P G P P R+ PP P + P + +A P
Sbjct: 335 SLPPPPPPPRSNAAGSIP----LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPA 390
Query: 734 PPXXTAXPHXPXXPTPXXGTHXHRRXPPXPPSXHP 838
PP P P + P PPS P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +2
Query: 605 PAPQLRXXPGHPRTXXFPPXPXTPXXQXXHPXTPMQAXPXXPHPPXXTAXPHXPXXPTP 781
PA + P P++ PP P P PM P PP P P P P
Sbjct: 1683 PAHPVSTPPVRPQSAA-PPQMSAPTP----PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +2
Query: 560 SXPTPXXXPSPIXTGPAPQLRXXPGHPRTXXFPPXPXTPXXQXXHP 697
S PTP P P+ P P P P + PP P + +P
Sbjct: 1703 SAPTPP--PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 9.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -1
Query: 836 GXXREGXGAXGGGXGCRXXXWGXXGXAGXXXXSGGGXXTXKPAXGXGGGXVGRXG 672
G R G G GG G G G GG G GG GR G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,202,807
Number of Sequences: 5004
Number of extensions: 29454
Number of successful extensions: 149
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 537243034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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