Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_K01
(849 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 82 1e-14
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 73 1e-11
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 56 1e-06
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 47 5e-04
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 47 7e-04
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 43 0.011
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.026
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 40 0.10
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 39 0.14
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 39 0.14
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 38 0.24
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 37 0.74
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 35 3.0
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 35 3.0
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 316 EKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
EKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHG
Sbjct: 43 EKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHG 80
Score = 43.2 bits (97), Expect = 0.008
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 204 PQAADIPEIKLFGRWSCYDVQVSDMSLQ 287
P A+ P+IKLFG+WS DVQ++D+SLQ
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQ 36
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 319 KYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
K+A Y+PH+AGRY+ KRFRKAQCPIVERLTNSLMMHG
Sbjct: 37 KHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHG 73
Score = 33.5 bits (73), Expect = 6.9
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 225 EIKLFGRWSCYDVQVSDMSL 284
E+KLF RWS DVQ+SD+SL
Sbjct: 8 EVKLFNRWSFDDVQLSDVSL 27
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 334 LPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
LPH+AGR+ KRFRKA+C IVERLTNSLMM+G
Sbjct: 48 LPHTAGRFQTKRFRKARCFIVERLTNSLMMNG 79
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 47.2 bits (107), Expect = 5e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +1
Query: 331 YLPHSAGRYAHKRFRKAQCPIVERLTNSLM 420
YLPH+ GR+A KRF KA+ PIVERL N +M
Sbjct: 41 YLPHTGGRHAKKRFAKAEVPIVERLINRVM 70
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 46.8 bits (106), Expect = 7e-04
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 316 EKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMM 423
+KY + +PHS+G Y K F+K CPI+ERL SLM+
Sbjct: 46 KKYGELVPHSSGNYDKKPFKKTYCPILERLVCSLML 81
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 42.7 bits (96), Expect = 0.011
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 334 LPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
LPH+ GRY + RF KA+ PIVERL N +M G
Sbjct: 68 LPHTEGRYQNTRFGKARIPIVERLINLMMRPG 99
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 41.5 bits (93), Expect = 0.026
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 207 QAADIPEIKLFGRWSCYDVQVSDMSLQXPXXXSRXKXEVRK 329
Q A++P+IKLFGRWS D+ +SD+S+ S ++K
Sbjct: 25 QPAELPDIKLFGRWSSDDIHISDISVSDYIAGSSNSYAIKK 65
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 39.5 bits (88), Expect = 0.10
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 379 AQCPIVERLTNSLMMHG 429
AQCPIVERLTNS+MMHG
Sbjct: 1 AQCPIVERLTNSMMMHG 17
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 39.1 bits (87), Expect = 0.14
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 328 KYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
+ LPH+ GR+A K F KA IVERL N +M G
Sbjct: 45 RLLPHTHGRHAKKHFGKANVHIVERLINKVMRSG 78
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 39.1 bits (87), Expect = 0.14
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +1
Query: 334 LPHSAGRYAHKRFRKAQCPIVERLTNSLM 420
+PHS+G++A ++F K++ IVERL N+LM
Sbjct: 34 VPHSSGKHARQQFNKSEISIVERLANNLM 62
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 38.3 bits (85), Expect = 0.24
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 340 HSAGRYAHKRFRKAQCPIVERLTNSLMMHGS 432
H+ GR+A K+F+K++ IVERL N LM G+
Sbjct: 57 HTMGRHAQKQFKKSEISIVERLANRLMKTGA 87
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 36.7 bits (81), Expect = 0.74
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 334 LPHSAGRYAHKRFRKAQCPIVERLTNSLM 420
+PHS G+++ + F KA IVERL N LM
Sbjct: 49 IPHSCGKFSRQEFNKANMMIVERLINRLM 77
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 34.7 bits (76), Expect = 3.0
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2
Query: 428 PCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 321
P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 20 PGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 334 LPHSAGRYAHKRFRKAQCPIVERLTNSLM 420
+PH+AGR + K F K + +VERL N LM
Sbjct: 38 IPHTAGRNSKKMFDKNKMHVVERLANKLM 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,901,936
Number of Sequences: 1657284
Number of extensions: 4849791
Number of successful extensions: 9074
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9074
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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