Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K01
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300...    74   1e-13
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419           73   2e-13
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    28   8.2  

>11_04_0317 -
           16328558-16328612,16328698-16328901,16329794-16330065,
           16330152-16330220
          Length = 199

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +1

Query: 319 KYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
           K+A YLPH+AGRY+ KRFRKAQCPIVERLTNSLMMHG
Sbjct: 39  KHATYLPHTAGRYSAKRFRKAQCPIVERLTNSLMMHG 75



 Score = 33.9 bits (74), Expect = 0.16
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 225 EIKLFGRWSCYDVQVSDMSL 284
           E+KLF RWS  DVQV+D+SL
Sbjct: 10  EVKLFSRWSFEDVQVNDISL 29


>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
          Length = 200

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +1

Query: 319 KYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
           K+A YLPH+AGRY+ KRFRKAQCP+VERLTNSLMMHG
Sbjct: 40  KHATYLPHTAGRYSAKRFRKAQCPLVERLTNSLMMHG 76



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +3

Query: 228 IKLFGRWSCYDVQVSDMSL 284
           +KLF  WS  DVQV+D+SL
Sbjct: 12  VKLFNCWSFEDVQVNDISL 30


>07_01_0077 +
           566895-567127,567207-567331,571204-571340,571437-571542,
           571635-571885,572018-572128,572209-572320,572626-572716,
           573168-573507,573678-573900,573946-574204,574274-574481,
           574572-574622,574712-574870,574956-575120,575322-575399,
           575732-576031,576107-576259,576871-576918,577019-577188,
           577738-577852,578462-578623,578789-578893,578969-579199,
           579277-579410,579484-579738,579822-580110,580214-580306,
           580395-580520,580646-580897
          Length = 1693

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 166 PRQAAWLWKPCLYHKPPTF 222
           P Q +WLW+  L H P  F
Sbjct: 90  PSQCSWLWREVLKHNPDAF 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,024,791
Number of Sequences: 37544
Number of extensions: 146057
Number of successful extensions: 288
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)