Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_K01
         (849 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5 pr...    82   2e-15
BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5 pr...    82   2e-15
AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5 va...    82   2e-15
AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5 pr...    82   2e-15
U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5 prot...    78   5e-14
AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5 va...    40   0.015

>BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +1

Query: 316 EKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
           EKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHG
Sbjct: 43  EKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHG 80



 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +3

Query: 204 PQAADIPEIKLFGRWSCYDVQVSDMSLQ 287
           P  A+ P+IKLFG+WS  DVQ++D+SLQ
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQ 36


>BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +1

Query: 316 EKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
           EKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHG
Sbjct: 43  EKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHG 80



 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +3

Query: 204 PQAADIPEIKLFGRWSCYDVQVSDMSLQ 287
           P  A+ P+IKLFG+WS  DVQ++D+SLQ
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQ 36


>AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 204

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +1

Query: 316 EKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
           EKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHG
Sbjct: 43  EKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHG 80



 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +3

Query: 204 PQAADIPEIKLFGRWSCYDVQVSDMSLQ 287
           P  A+ P+IKLFG+WS  DVQ++D+SLQ
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQ 36


>AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +1

Query: 316 EKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
           EKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHG
Sbjct: 43  EKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHG 80



 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +3

Query: 204 PQAADIPEIKLFGRWSCYDVQVSDMSLQ 287
           P  A+ P+IKLFG+WS  DVQ++D+SLQ
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQ 36


>U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score = 77.8 bits (183), Expect = 5e-14
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +1

Query: 316 EKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHG 429
           EKYAKYLPHSAGRYA   FRKAQCPIVERLTNS+MMHG
Sbjct: 43  EKYAKYLPHSAGRYAANAFRKAQCPIVERLTNSMMMHG 80



 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +3

Query: 204 PQAADIPEIKLFGRWSCYDVQVSDMSLQ 287
           P  A+ P+IKLFG+WS  DVQ++D+SLQ
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQ 36


>AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 107

 Score = 39.5 bits (88), Expect = 0.015
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +1

Query: 379 AQCPIVERLTNSLMMHG 429
           AQCPIVERLTNS+MMHG
Sbjct: 1   AQCPIVERLTNSMMMHG 17


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,849,246
Number of Sequences: 237096
Number of extensions: 781904
Number of successful extensions: 1244
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)