Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J23
         (959 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    27   0.19 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.25 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   1.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   1.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   5.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   5.4  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 0.19
 Identities = 18/64 (28%), Positives = 19/64 (29%)
 Frame = +3

Query: 639 PPPXPPXXPLXXPPPXPPXPSXPXXXPXPXPXPSXXPPPPXPPPPXXXXXXPPPPXXXXX 818
           P P PP   L   P   P  + P   P P P        P   P        P P     
Sbjct: 107 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQP----R 162

Query: 819 PPXP 830
           PP P
Sbjct: 163 PPHP 166


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 0.25
 Identities = 12/36 (33%), Positives = 12/36 (33%)
 Frame = +3

Query: 717 PXPXPXPSXXPPPPXPPPPXXXXXXPPPPXXXXXPP 824
           P P P P   P  P    P      PPP      PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 25.8 bits (54), Expect = 0.58
 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
 Frame = +3

Query: 675 PPPXP-PXPSXPXXXPXPXPXPSXXPPPPXPP--PP 773
           P P P P  S         P PS  PPP  PP  PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 24.2 bits (50), Expect = 1.8
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +1

Query: 874 PPPPPLXXPXPXXPXXXXPPXPXPPPP 954
           P P P     P  P    PP P   PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPP 47



 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/36 (30%), Positives = 13/36 (36%)
 Frame = +3

Query: 645 PXPPXXPLXXPPPXPPXPSXPXXXPXPXPXPSXXPP 752
           P PP   +      PP P+ P   P     PS   P
Sbjct: 416 PMPPIPNMSNMSGMPPLPNMPGSMPTMPTMPSMAGP 451


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = -2

Query: 838 GXGGXGGXXXXXGGGGXXXXXXGGGGXGGGGXXEG 734
           G    GG      GG        GGG GG G   G
Sbjct: 23  GSSSAGGVVTGASGGSIVVGANNGGGGGGLGIASG 57


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 738 SXXPPPPXPPPPXXXXXXP 794
           S  PP P PPPP      P
Sbjct: 335 SDTPPKPAPPPPPPSSSGP 353



 Score = 23.0 bits (47), Expect = 4.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 928 PPXPXPPPP 954
           PP P PPPP
Sbjct: 338 PPKPAPPPP 346



 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 663 PLXXPPPXPPXPSXP 707
           P   PPP PP  S P
Sbjct: 339 PKPAPPPPPPSSSGP 353


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 747  PPPPXPPP 770
            PPPP PPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 23.4 bits (48), Expect = 3.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 750  PPPXPPPP 773
            PPP PPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 675  PPPXPPXPS 701
            PPP PP PS
Sbjct: 1355 PPPPPPPPS 1363


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -2

Query: 802  GGGGXXXXXXGGGGXGGGGXXEGXG 728
            GGGG      G GG GG       G
Sbjct: 1705 GGGGSLAGLGGLGGLGGAAEASAAG 1729


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -2

Query: 802  GGGGXXXXXXGGGGXGGGGXXEGXG 728
            GGGG      G GG GG       G
Sbjct: 1701 GGGGSLAGLGGLGGLGGAAEASAAG 1725


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,030
Number of Sequences: 438
Number of extensions: 11249
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31565079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)