Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J21
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical p...    29   4.2  
AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine re...    28   9.8  

>Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +1

Query: 73  PVTIQNVFQGVCYPLHSLYA*TLKFLCLLVTQRSIRSPANFQGQSDTLAIFTTLSL 240
           P T++ V  G C  +  + A    F+  + +++S+  P    G +  L +  +LSL
Sbjct: 452 PTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLSLPIGIYGTAAILGLIASLSL 507


>Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +1

Query: 73  PVTIQNVFQGVCYPLHSLYA*TLKFLCLLVTQRSIRSPANFQGQSDTLAIFTTLSL 240
           P T++ V  G C  +  + A    F+  + +++S+  P    G +  L +  +LSL
Sbjct: 452 PTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLSLPIGIYGTAAILGLIASLSL 507


>AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 68 protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 105 NTLEYILNCDRFRCSRQE 52
           NT++  +NCD FRCS  E
Sbjct: 149 NTIDTPMNCDHFRCSFNE 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,253,775
Number of Sequences: 27780
Number of extensions: 263371
Number of successful extensions: 614
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)