Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J21
         (857 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    24   1.6  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   2.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   6.3  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   8.3  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 343 DRGKLTGQAYGTRVLGPGGDSTSYGG 420
           D+  +TG AYG   + PG  S  + G
Sbjct: 66  DKNGMTGDAYGGLNIRPGQPSRQHAG 91


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 44  FXHSCLEQRNLSQFKMYSKVFVIRCIP 124
           F   CLE  + S  K+ S++FVIR  P
Sbjct: 72  FLLQCLEDLDCSLRKLNSRLFVIRGQP 98


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 448 WRSHWPSLDDHRNWY 404
           W +H P+ D   NWY
Sbjct: 661 WLNHSPNYDQVTNWY 675


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 50  HSCLEQRNLSQFKMYSKVFVIRCIPCMRERSSF 148
           H+C E R   +     K+F    IP ++E S F
Sbjct: 254 HACAEYRRNFKKMQEEKIFEPHRIPQLQEVSEF 286


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 197 KVSPTPSRYSRLCHLGQGNGGREGLRDFGRERPRTF 304
           + S   SRY  L H  + +   +G R   R+R R +
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRSREY 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,538
Number of Sequences: 438
Number of extensions: 3475
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)