Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_J19
(1157 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.22
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.2
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 8.2
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 33.9 bits (74), Expect = 0.22
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 896 PRPXPXXXRXPPPXXNXXPXXPP*T-RTTRX*PXXXXPXXLP-HPXRSXKRPXPPXXPXX 1069
P P P R PPP + P PP T + + P P P +P R+ P PP P
Sbjct: 140 PPPPPRVPRTPPPR-SPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRL 198
Query: 1070 LTHXR 1084
+H R
Sbjct: 199 NSHDR 203
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -1
Query: 1061 GX*GXXDAWXIGAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXG 894
G G + G G G G R GW G GGG G G G GG G
Sbjct: 219 GGGGGGGGYGSGGGWGGGGGGRDRDRGGWG---GGGGGRGYGGGGGGGGYGYGGGG 271
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXGXXEWXXRGXXXXGAX 849
G G G G G G G + GGG G G G GG G G GA
Sbjct: 791 GGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAG 850
Query: 848 XRXG 837
G
Sbjct: 851 AGNG 854
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = -1
Query: 1022 GVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXG-XGGXGXXEWXXRGXXXXGAXX 846
G G G G GW G GGG G G G G G +W G G
Sbjct: 110 GGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGG 169
Query: 845 RXG 837
G
Sbjct: 170 GRG 172
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = -1
Query: 1061 GX*GXXDAWXIGAGVGEXSGXXGXARXGWXVFKGXA-XAXDXGGGEGXXGXGXGGXG 894
G G W G G SG G GW G + GGG G G G GG G
Sbjct: 47 GWGGGGPGWGRGGG---GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGG 100
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXGXXEWXXRGXXXXGAX 849
G+G G G G + G + GGG G G G GG G RG G
Sbjct: 61 GSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG-GGGRGGGGGGGG 119
Query: 848 XRXG 837
R G
Sbjct: 120 GRGG 123
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein
C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXG 894
G G G G G G G GGG G G G GG G
Sbjct: 89 GCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGG 133
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXGXXEWXXRGXXXXG 855
G G G G R G +G GGG G G GG G RG G
Sbjct: 150 GGGRGRGGRGRGGDRGGRGSDRGGRGGFGRGGGGGFRGGDRGGFGGGRGGFRGGDRGG 207
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXG 894
G G G G G G G GGG G G G GG G
Sbjct: 143 GGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCG 187
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 29.1 bits (62), Expect = 6.2
Identities = 27/106 (25%), Positives = 32/106 (30%), Gaps = 1/106 (0%)
Frame = -1
Query: 1151 GXWGGXIXXDGXXXXLEXXGXXXVXX*EXXGX*GXXDAWXIGAGVGEXSGXXGXARXGWX 972
G WGG G G G G G+G G +G G GW
Sbjct: 36 GGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSG-GAGAGGSGSGSGGWG 94
Query: 971 VFKGXAXAXDXGGGE-GXXGXGXGGXGXXEWXXRGXXXXGAXXRXG 837
G + A GG + G G GG G G G + G
Sbjct: 95 GQDGGSSAGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQG 140
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXG 894
G G G G G G G GGG G G G GG G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXG 894
G G G G G G G GGG G G G GG G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXG 894
G G G G G G G GGG G G G GG G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 1028 GAGVGEXSGXXGXARXGWXVFKGXAXAXDXGGGEGXXGXGXGGXG 894
G G G G G G G GGG G G G GG G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,569,807
Number of Sequences: 27780
Number of extensions: 85740
Number of successful extensions: 338
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3151206316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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