Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_J16
(843 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 38 0.002
SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar... 32 0.12
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 28 1.4
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 2.5
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 27 2.5
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 27 3.3
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 27 3.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.4
SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4 |Sc... 26 7.7
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 37.5 bits (83), Expect = 0.002
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 167 VTTLTPVPSKPVHPTLPPNQIKPV--PVYPTPATRPITTPGPGSVQQLVTFYNSQXXGSV 340
V LTPVP KP P+ P ++ PV P+ PTP +R P L T Y S
Sbjct: 149 VAALTPVPKKPSKPSKPRKKV-PVSHPLPPTPPSREEHVSVPRE-SSLFT-YEDDPLPSF 205
Query: 341 IRPYSYSDAVKQG*TFNENIKD 406
PY D Q ++N+ D
Sbjct: 206 PSPYMVDDYYTQDVFVSDNVND 227
>SPCC1393.08 |||transcription factor, zf-GATA type
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 191 SKPVHPTLPPNQIKPVPVYPTPATRPITTPGPGSVQQLVTFYNSQ 325
SK PT PP P PTP++ I TP PG++ F SQ
Sbjct: 153 SKTSEPT-PPFSYVQTPCIPTPSSALIDTPFPGALDSEFGFDESQ 196
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 200 VHPTLPPNQIKPVPVYPTPATRPITTPGPGS 292
++P P ++KP PTPA T+P P S
Sbjct: 314 INPKRRPIEVKPAAPVPTPAPPVKTSPHPAS 344
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 182 PVPSKPVHPTLPPNQIKPVPVYPTPATRPI 271
PVP +P+ P PP +PVP P P P+
Sbjct: 113 PVPEEPL-PGEPPLPDEPVPEEPLPGEPPL 141
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 187 TFEAGSSNSTTQPD*ACPCVPYSSDAAHHHSRT 285
TFE ++N D + C Y++ A+HH S +
Sbjct: 4576 TFEQSNTNVLALADASMKCFNYANTASHHRSNS 4608
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 TLTPVPSKPVHPTLPP-NQIKPVPVYPTPATRPITTPGPGSVQQLVT 310
+LTP+ S+P H +LPP ++ P RP SV +++
Sbjct: 360 SLTPLSSRPAHTSLPPIPTVQTTSSNVPPVNRPSLKSKSPSVSNILS 406
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 193 RRYRR*SCH-DRFDLSWRYGCRSRLDNRRLCEWL 95
R +R+ + H D D WRY +R+ + EWL
Sbjct: 236 RAFRQANAHPDSMDFHWRYNGTARMTTSIMEEWL 269
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 182 PVPS-KPVHPTLPPNQIKPVPVYPTPATRPITTPGP 286
PVPS P+ T P +PVYP+P R + T P
Sbjct: 58 PVPSTNPILTTEPIVGPAALPVYPSPLYRDLQTNTP 93
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 182 PVPSKPVHPTLPPNQIKPVPVYPTPATRPITTPGPG 289
PVP P +P + PV P P+ TP G
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
>SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 309 VTSCCTLPGPGVVMGRVAGVGY-TGTGLIWL 220
+T+C T+PG G++ G + VG G GL+ L
Sbjct: 120 ITNCHTVPGEGIIQG-LKEVGLPLGRGLLLL 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,397,765
Number of Sequences: 5004
Number of extensions: 43693
Number of successful extensions: 169
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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