Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J15
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0231 + 42176598-42178117,42178232-42179753                       30   2.8  
11_01_0614 + 4911167-4911830,4911944-4911984                           29   6.4  
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857...    29   6.4  
09_04_0030 + 13940168-13940250,13940703-13941714                       28   8.5  
09_04_0029 - 13932414-13933416,13933821-13933903                       28   8.5  

>01_07_0231 + 42176598-42178117,42178232-42179753
          Length = 1013

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 671 MKMGXPPTLDPNTKPLPKGGDHKIALIGGGPAS 769
           M +  P  LDPN  P    GD+ +   G GPAS
Sbjct: 597 MNVAKPLVLDPNEYPHGGDGDNNLETSGRGPAS 629


>11_01_0614 + 4911167-4911830,4911944-4911984
          Length = 234

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 647 QHFAVDIFMKMGXPPTLDPNTKPLPKGGDHKIALIGGGPASIXCA 781
           Q  A+D+      P  LD  T P      H +A  G G  S+ CA
Sbjct: 34  QQVAIDVGSGQQSPLLLDAATTPQGDSALHVVAASGDGEGSLRCA 78


>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
            28085948-28086253,28086369-28086643,28087034-28087252,
            28087486-28089015,28089236-28089397,28089512-28089666,
            28090195-28091064,28091363-28091832,28091917-28091981,
            28092105-28092448,28092531-28092710,28092817-28092920,
            28093053-28093162,28093648-28093744,28094138-28094238,
            28094324-28094476,28094561-28094674,28094795-28094884,
            28094960-28095307
          Length = 2157

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 24/74 (32%), Positives = 34/74 (45%)
 Frame = +2

Query: 560  GMVCPTSDLCVGGCNLHATEXGAIXIGGLQHFAVDIFMKMGXPPTLDPNTKPLPKGGDHK 739
            G VCP    C G C L   E   + I  ++   +D   + G    + P   PL + G  K
Sbjct: 1747 GRVCPAP--CEGSCVLGIIE-NPVSIKSIECAIIDKGFEEGW---MVPRP-PLQRTGK-K 1798

Query: 740  IALIGGGPASIXCA 781
            +A+IG GPA +  A
Sbjct: 1799 VAIIGSGPAGLAAA 1812


>09_04_0030 + 13940168-13940250,13940703-13941714
          Length = 364

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +2

Query: 551 LTCGMVCPTSDLCVGGCNLHATEXGAIXIGGLQHFAVDIFMKMGXPPTL 697
           L C  V   S + + G N      G + +GGL H AV      G   T+
Sbjct: 162 LLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTV 210


>09_04_0029 - 13932414-13933416,13933821-13933903
          Length = 361

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +2

Query: 551 LTCGMVCPTSDLCVGGCNLHATEXGAIXIGGLQHFAVDIFMKMGXPPTL 697
           L C  V   S + + G N      G + +GGL H AV      G   T+
Sbjct: 159 LLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTV 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,710,581
Number of Sequences: 37544
Number of extensions: 443375
Number of successful extensions: 917
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)