Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J11
         (959 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   4.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   5.9  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   7.9  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 833 AXKNTXSPSHFLPXAXPXPSR 895
           A K+T  P HFL    P P R
Sbjct: 365 APKSTAHPDHFLDHRSPSPQR 385


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 469 PXVFCKLYXTCLXQXXGTCP 528
           P VFC++Y  CL +  GT P
Sbjct: 463 PDVFCRMYQDCLTR--GTFP 480


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 469 PXVFCKLYXTCLXQXXGTCPE 531
           P VFC++Y  CL    GT P+
Sbjct: 471 PGVFCRVYQDCL--NTGTFPQ 489


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,155
Number of Sequences: 2352
Number of extensions: 4808
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105430005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)