Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J09
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   2.0  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   4.7  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    23   4.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.2  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    22   8.2  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   8.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 522 IGGSAYASAMVTSTSTPGS 466
           +G  +Y +A + +TSTPGS
Sbjct: 220 MGRPSYTTATMATTSTPGS 238


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 124 IPAEINNFSIKNCSALNRRNTHVXRQKS*XXPRGEA 17
           +P +   F++KN S    R  +V        PRG A
Sbjct: 303 LPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAA 338


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 124 IPAEINNFSIKNCSALNRRNTHVXRQKS*XXPRGEA 17
           +P +   F++KN S    R  +V        PRG A
Sbjct: 14  LPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAA 49


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 286 EAACKGPSPHANQDPAYHH 342
           E +  G SPH +Q P+ +H
Sbjct: 621 EISQDGSSPHFHQSPSQNH 639


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 155 TLQRLPCCLLNSGRD 111
           TL R PC LLN   D
Sbjct: 22  TLGRFPCLLLNGKXD 36


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 124 IPAEINNFSIKNCSALNRRNTHVXRQKS*XXPRGEA 17
           +P +   F++KN S    R  +V        P+G A
Sbjct: 303 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAA 338


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 268 QWSQETEAACKGPSPHANQDP 330
           Q SQ+  +   GP P  +Q P
Sbjct: 11  QQSQQPSSGAPGPQPSPHQSP 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,042
Number of Sequences: 438
Number of extensions: 3699
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)