Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J07
         (863 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    34   4.0  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
 Frame = +1

Query: 187 NALSIGSITSSDXLLRSFVVSRAATTNS-RAVNVRYTAPXXXXXXXXXXXXSTQFASVRR 363
           + +S+G+I +SD LL +   SR    N  + VNVRYT              S Q A+ R 
Sbjct: 74  SGMSLGNIGASDRLLSASTHSRNPIANQVQTVNVRYTGSSSIIILAVRAYGSGQGATARV 133

Query: 364 TGGGVGFTFVNLQXRERAAK----RI*LYSTSLGTLKCIFW 474
             G +G   + +Q +    +    RI ++   +   K + W
Sbjct: 134 VEGYLGRNSITIQLQSARGRGFHYRIEIWGRQVFLEKVVSW 174


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,853,529
Number of Sequences: 1657284
Number of extensions: 7245216
Number of successful extensions: 16586
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 16239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16581
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)