Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J06
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0213 + 20974712-20975413                                         31   1.2  
12_01_0160 - 1212295-1213586,1213828-1213976,1214288-1214445,121...    31   1.6  
10_01_0127 - 1519803-1520036,1520802-1521095,1521840-1522614,152...    28   8.5  

>02_04_0213 + 20974712-20975413
          Length = 233

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +1

Query: 364 ITKENEEKSIQTHLELSRQEKAAWEETKMYGWQDFQDFTLRRMFKKYSQLGVAALP 531
           + +E EE+ +    E  R  +A  EE     W+DF D  L ++ ++  Q   A  P
Sbjct: 73  VDEEEEEERMDQLWERDRDARAGDEERMDLLWEDFNDELLLQLRRRQQQRAAAGTP 128


>12_01_0160 -
           1212295-1213586,1213828-1213976,1214288-1214445,
           1214860-1215004,1215102-1215226
          Length = 622

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 493 FKKYSQLGVAALPDDKFQALMRTVSGMESNYATAKICSYKNESKCDLSLEPEI 651
           F+K    G A LPDD+ + L +  +G++ N  T ++   K+ S C    + +I
Sbjct: 428 FQKPFVGGFAILPDDEDEQLEKNDNGVKINSGTVQLTDDKDTSLCSRQTDSKI 480


>10_01_0127 -
           1519803-1520036,1520802-1521095,1521840-1522614,
           1524574-1525412
          Length = 713

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/73 (20%), Positives = 37/73 (50%)
 Frame = +1

Query: 481 LRRMFKKYSQLGVAALPDDKFQALMRTVSGMESNYATAKICSYKNESKCDLSLEPEITEI 660
           + ++F+K  +L   A    + QAL + ++G+   Y+  ++   +N      +++P +T +
Sbjct: 109 ISKLFRKAKELHQIADAIKEAQALAQQMAGLRERYSGLEL---QNSGMVTSTIDPRLTAL 165

Query: 661 FSTSQDPEELKHA 699
           +  + D   + HA
Sbjct: 166 YIDATDLVGIDHA 178


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.128    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,200,368
Number of Sequences: 37544
Number of extensions: 384651
Number of successful extensions: 962
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)