Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J06
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    48   9e-06
U88165-10|AAK21395.1|  161|Caenorhabditis elegans Paralysed arre...    32   0.47 
D45896-1|BAA82524.1|  161|Caenorhabditis elegans troponin C prot...    32   0.47 
D45895-1|BAA82523.1|  161|Caenorhabditis elegans troponin C prot...    32   0.47 
U58732-7|AAB00597.1|  345|Caenorhabditis elegans Taf (tbp-associ...    29   4.4  
Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF016687-9|AAK72064.2|  569|Caenorhabditis elegans Hypothetical ...    29   5.8  

>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 33/161 (20%), Positives = 65/161 (40%)
 Frame = +1

Query: 334 SLAEWEYTSNITKENEEKSIQTHLELSRQEKAAWEETKMYGWQDFQDFTLRRMFKKYSQL 513
           +L+ W Y ++ +   +    +    L+   ++   + K +      D  + R     S  
Sbjct: 200 ALSGWRYFNDASPSLKLALDEAENVLTMFVRSTSMQAKQFDMASVTDEKVMRQLGYVSFE 259

Query: 514 GVAALPDDKFQALMRTVSGMESNYATAKICSYKNESKCDLSLEPEITEIFSTSQDPEELK 693
           G++AL   +F    +  + +  +   + IC       C L  + ++  IF   +D   L+
Sbjct: 260 GMSALAPSRFADYSQAQAALNRDSKDSTICDKDVPPPCALQ-KIDMDSIFRNEKDASRLQ 318

Query: 694 HAWVEWHNXXXXXXXXNFTDYVNLYNEAAKLNGFDNVXEWW 816
           H WV +          ++ + + + NE AKLNGF N    W
Sbjct: 319 HLWVSYVTAIAKSKP-SYNNIITISNEGAKLNGFANGGAMW 358


>U88165-10|AAK21395.1|  161|Caenorhabditis elegans Paralysed arrest
           at two-fold protein10 protein.
          Length = 161

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +1

Query: 448 MYGW-QDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVS 567
           M+G  QDF + TLR++ +K+   G   L  D+F AL+ TV+
Sbjct: 44  MHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVA 84


>D45896-1|BAA82524.1|  161|Caenorhabditis elegans troponin C
           protein.
          Length = 161

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +1

Query: 448 MYGW-QDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVS 567
           M+G  QDF + TLR++ +K+   G   L  D+F AL+ TV+
Sbjct: 44  MHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVA 84


>D45895-1|BAA82523.1|  161|Caenorhabditis elegans troponin C
           protein.
          Length = 161

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +1

Query: 448 MYGW-QDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVS 567
           M+G  QDF + TLR++ +K+   G   L  D+F AL+ TV+
Sbjct: 44  MHGMEQDFDEKTLRKLIRKFDADGSGKLEFDEFCALVYTVA 84


>U58732-7|AAB00597.1|  345|Caenorhabditis elegans Taf
           (tbp-associated transcriptionfactor) family protein 11.1
           protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 370 KENEEKSIQTHLELSRQEKAAWEETKMYGWQDFQDFTLRRMFKKYS 507
           +ENE   ++T + LS   +   E  + Y    FQ  T+RR+  +Y+
Sbjct: 227 EENELSRLKTQVLLSNFSQEQLERYESYRRSSFQKSTIRRLISQYT 272


>Z68106-5|CAA92129.1|  557|Caenorhabditis elegans Hypothetical
           protein F41E7.6 protein.
          Length = 557

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
 Frame = +1

Query: 391 IQTHLELSRQEKAAWEETKMYGWQDFQDFTLRRMFKKYSQLGVAALPDDKFQALMRTVSG 570
           + ++  L RQEK    +++   W   QD+ L      ++   V ALP D+ +   RT + 
Sbjct: 119 LMSYWSLIRQEKIEVTKSRGNSWDMNQDYNL------FNACRVPALPKDRIKRYFRTEAE 172

Query: 571 MESNYATAKICS---YKNESKCDLSLEPEITEIFSTSQDPEELKHAWVE 708
            +       +C+   +K E+ C+ S    I EI +  +  +E     VE
Sbjct: 173 GKCPSHVIILCNGHVWKLETTCENSKFLNIFEIQNALKRIKESSRTSVE 221


>AF016687-9|AAK72064.2|  569|Caenorhabditis elegans Hypothetical
           protein T21D12.9b protein.
          Length = 569

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 30  FLKLXVIDWPAHXSAGVXF*LHPNIANSNQQKKSINEVFVQRLINTNDAESGG 188
           F  L + D P + S      ++P I ++   +   NE+ ++  ++TND E GG
Sbjct: 342 FWGLAIAD-PLYSSDTANIHINPQIGSAATYETQENEIIMRPHVDTNDMEDGG 393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.128    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,473,299
Number of Sequences: 27780
Number of extensions: 309882
Number of successful extensions: 981
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)