Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J04
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   1.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 448 FGSFLSSCNTSTTGFIFF 501
           FGSF+ + N++  G IFF
Sbjct: 262 FGSFIFNANSAIEGIIFF 279


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 607 LLFYFCYFIQMLQSYF 560
           L+F FCYFI +   Y+
Sbjct: 143 LVFVFCYFIYLFTVYY 158


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = -1

Query: 472 YKMIRTIRINFHSCW*RYSLLNVSSLLIKIFTESGYIDI 356
           YKM     +NF +       ++++   ++ F+  G+ DI
Sbjct: 705 YKMQEQFTLNFRNSDELIKFISIAKHNVRTFSAGGFFDI 743


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 494 MKPVVDVLQDDKNDPN 447
           M P++  L  DKN PN
Sbjct: 213 MLPIIHNLLSDKNPPN 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,544
Number of Sequences: 336
Number of extensions: 3228
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)