Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J03
         (1336 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    30   4.2  
U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical p...    30   4.2  
Z69658-1|CAA93481.1|  418|Caenorhabditis elegans Hypothetical pr...    29   7.4  
U27312-10|AAA68253.1|  231|Caenorhabditis elegans Hypothetical p...    29   7.4  
U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical pr...    29   7.4  
U38378-1|AAA79751.1|  418|Caenorhabditis elegans Hypothetical pr...    29   9.8  

>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 913 RPXHXPXPPXPTSPXRXPSSXPP 981
           RP   P PP PT P   PS+ PP
Sbjct: 82  RPVVNPAPPLPTLPTPPPSTLPP 104


>U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical
            protein B0207.1 protein.
          Length = 564

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/55 (29%), Positives = 19/55 (34%)
 Frame = +2

Query: 1085 SXSXPPXPLPLXXTRXPPLALXXSXPPLPQHPXSARXXPAPARXXSLXTTSXPPP 1249
            S   PP  + L  T   PL      PPLP+ P +      P           PPP
Sbjct: 72   STGLPPMTMMLPPTVQEPLPTPVKTPPLPRPPGNLNPVQQPQIPVQRTPPQCPPP 126


>Z69658-1|CAA93481.1|  418|Caenorhabditis elegans Hypothetical protein
            C36H8.1 protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 17/56 (30%), Positives = 22/56 (39%)
 Frame = +2

Query: 1082 TSXSXPPXPLPLXXTRXPPLALXXSXPPLPQHPXSARXXPAPARXXSLXTTSXPPP 1249
            T+ S PP P P    + PP  +  + PP P  P       AP    +      PPP
Sbjct: 172  TAISAPPPPRP--PPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPP 225


>U27312-10|AAA68253.1|  231|Caenorhabditis elegans Hypothetical
           protein F26A1.12 protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 922 HXPXPPXPTSPXRXPSSXPP 981
           H P PP P  P R P + PP
Sbjct: 46  HGPRPPRPNRPPRPPPATPP 65


>U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical
           protein F26A1.11 protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 913 RPXHXPXPPXPTSPXRXPSSXP 978
           RP   P PP P+ P R P S P
Sbjct: 32  RPPRPPRPPSPSRPQRPPPSRP 53


>U38378-1|AAA79751.1|  418|Caenorhabditis elegans Hypothetical protein
            R11F4.3 protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 1163 PLPQHPXSARXXPAPARXXSLXTTSXPPP 1249
            P+PQ P  A   P P    +  TT+ PPP
Sbjct: 155  PIPQPPRFAEVPPIPDAPTNPPTTTTPPP 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,322,170
Number of Sequences: 27780
Number of extensions: 131599
Number of successful extensions: 634
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3746404080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)