Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_J02
         (946 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SHT8 Cluster: Predicted protein; n=2; Nematostella ve...    36   2.0  
UniRef50_A7RXK9 Cluster: Predicted protein; n=2; Nematostella ve...    31   6.7  

>UniRef50_A7SHT8 Cluster: Predicted protein; n=2; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1505

 Score = 35.5 bits (78), Expect = 2.0
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -1

Query: 496  FFXXWXPPPXGXXXXXXPPPPPXGGG 419
            FF    PPP G      PPPPP GGG
Sbjct: 949  FFGGIPPPPPGGGMFPPPPPPPPGGG 974


>UniRef50_A7RXK9 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 534

 Score = 30.7 bits (66), Expect(2) = 6.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 478 PPPXGXXXXXXPPPPPXGG 422
           PPP G      PPPPP GG
Sbjct: 375 PPPVGGAAPPPPPPPPVGG 393



 Score = 21.8 bits (44), Expect(2) = 6.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 445 PPPPPXGGG 419
           PPPPP G G
Sbjct: 413 PPPPPPGRG 421


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,809,214
Number of Sequences: 1657284
Number of extensions: 5282307
Number of successful extensions: 16026
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10363
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86957532651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)